Gene
| Gene Model ID | pfu_aug2.0_60.1_00151 |
|---|---|
| Locus | scaffold60.1 : 157516 ... 174985 : + |
| To GenomeBrowser | scaffold60.1:157516..174985 |
| Genes list of scaffold | scaffold60.1 |
| Synonym | pfu_aug1.0_38647.1_34076 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_60.1_00151.t1 | 1 | 1 | DSPc | 62 | 176 | 1.6e-10 | 40.7 | 1.3e-13 | 3.3e-10 | 39.6 |
| pfu_aug2.0_60.1_00151.t1 | 2 | 1 | mRNA_cap_enzyme | 274 | 346 | 2.2e-33 | 115.5 | 1.0e-25 | 2.5e-22 | 79.5 |
| pfu_aug2.0_60.1_00151.t1 | 2 | 2 | mRNA_cap_enzyme | 352 | 389 | 2.2e-33 | 115.5 | 8.7e-12 | 2.1e-08 | 34.0 |
| pfu_aug2.0_60.1_00151.t1 | 1 | 1 | mRNA_cap_C | 393 | 488 | 1.9e-27 | 95.6 | 1.7e-30 | 4.2e-27 | 94.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_60.1_00151.t1 | gi|625287503|ref|XP_007635468.1| | PREDICTED: mRNA-capping enzyme isoform X4 [Cricetulus griseus] | 0.0 |
| pfu_aug2.0_60.1_00151.t1 | gi|530620175|ref|XP_005299765.1| | PREDICTED: mRNA-capping enzyme isoform X2 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_60.1_00151.t1 | gi|602629848|ref|XP_007421846.1| | PREDICTED: mRNA-capping enzyme isoform X2 [Python bivittatus] | 0.0 |
| pfu_aug2.0_60.1_00151.t1 | gi|625181618|ref|XP_007639240.1| | PREDICTED: mRNA-capping enzyme isoform X2 [Cricetulus griseus] | 0.0 |
| pfu_aug2.0_60.1_00151.t1 | gi|507632856|ref|XP_004628278.1| | PREDICTED: mRNA-capping enzyme isoform X2 [Octodon degus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_60.1_00151.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_60.1_00151.t1 atgagccagggtaagaagcaactaggaccaccacctaggtggataaaatgtcctaggaaaggacaggtggtacaaggtaa atttctgcctttcaaaacaccactagatggtcgctatgatagcctcattccagaattcagtacgtttaatttagacatgc tgtttgccttcctcaaaagtatgaagctgaagatgggattacttatagatctgacaaacactacgaggttctacaacagt aaggaggtggaggagaaatttgagtgtaaatatgtcaagctgcagtgtagaggacatggagagactccatcaccagaaca gacgacggcttttatcgagctttgtggaagatacatctcacagaaaccactggaaatagtaggagtgcactgtactcatg gatttaacaggacaggattcctgatttgtgcttacttagtggagaggttgtcatggagtgttgaggcagccgtccaatgt tttgctcgatgtcgagagcccggtatatacaaacaagactacctggaggagttgttccgtcgttatggagaggtggagga cacgttcccagccccagctctaccagactggtgtgacgaatctgacacagtggatgatgatgggaattatctcggtgaag tgaatggtgaaggcagctcagcatctaaaggcaggaaaagggaatttgtaaaaaaggatgctaagtttatggaaggagtg aagaatgtagcacagcttcgtttacaaccaaaactagccgaagtacagaaaaaatgtcaagaaatgtgtggatggaggag ttcaggatttccaggatctcagcccgtttccatggatattcagaatataaacttcctcaaacagaaaccgtacaaggtca gctggaaggctgatggaaccagatacatgatgttgatagatggtccaaatgaagtgtatgcatttgaccgtgacaacaca gtgttccacattcccaacctcagatttcctcgaagaaaagatctcaatgctcacatcagagacactctattagatggggg ccaagatgttgagatattagatggatcttttgctagtcaagtcagccatgaagttgatggtttggtgttccagccaggtc ctgatccatactgtgcaggacgctgcagtgaagtattgaagtggaaacccccggatcaaaactctatagattttaaacta aagattgtgaaagagaacaaacctggcatgctgccaacaaccaaggcgtatttatttgtacttcatcaagagcacccgct ggctgaaatgaagtataccaaggatctgaaggagctagatgggaagatagtggagtgttattttgatggtcgagagtgga agtttatgagagtcagaacagataagtcgcaccccaacagtatcaaaacggctgaaggtgtgtggaaaagtatacaatca cctgttacaaaggacattttatttcatgtggcagaaaaagaacggttcgtgccacaacacaaaacaaaaacatcatctga acttatgccgcctccggcaaagattccaaaaaggtag |
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Protein
| Protein ID | pfu_aug2.0_60.1_00151.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_60.1_00151.t1 MSQGKKQLGPPPRWIKCPRKGQVVQGKFLPFKTPLDGRYDSLIPEFSTFNLDMLFAFLKSMKLKMGLLIDLTNTTRFYNS KEVEEKFECKYVKLQCRGHGETPSPEQTTAFIELCGRYISQKPLEIVGVHCTHGFNRTGFLICAYLVERLSWSVEAAVQC FARCREPGIYKQDYLEELFRRYGEVEDTFPAPALPDWCDESDTVDDDGNYLGEVNGEGSSASKGRKREFVKKDAKFMEGV KNVAQLRLQPKLAEVQKKCQEMCGWRSSGFPGSQPVSMDIQNINFLKQKPYKVSWKADGTRYMMLIDGPNEVYAFDRDNT VFHIPNLRFPRRKDLNAHIRDTLLDGGQDVEILDGSFASQVSHEVDGLVFQPGPDPYCAGRCSEVLKWKPPDQNSIDFKL KIVKENKPGMLPTTKAYLFVLHQEHPLAEMKYTKDLKELDGKIVECYFDGREWKFMRVRTDKSHPNSIKTAEGVWKSIQS PVTKDILFHVAEKERFVPQHKTKTSSELMPPPAKIPKR |
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