Gene
| Gene Model ID | pfu_aug2.0_60.1_00149 |
|---|---|
| Locus | scaffold60.1 : 115494 ... 131225 : - |
| To GenomeBrowser | scaffold60.1:115494..131225 |
| Genes list of scaffold | scaffold60.1 |
| Synonym | pfu_aug1.0_142197.1_21217 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_60.1_00149.t1 | 1 | 1 | Cmc1 | 154 | 218 | 2.6e-12 | 46.3 | 9.3e-16 | 6.9e-12 | 44.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_60.1_00149.t1 | gi|391332158|ref|XP_003740504.1| | PREDICTED: COX assembly mitochondrial protein homolog [Metaseiulus occidentalis] | 7.0e-10 |
| pfu_aug2.0_60.1_00149.t1 | gi|158297305|ref|XP_001689044.1| | AGAP007922-PA [Anopheles gambiae str. PEST] | 3.0e-09 |
| pfu_aug2.0_60.1_00149.t1 | gi|752890066|ref|XP_011263011.1| | PREDICTED: COX assembly mitochondrial protein homolog [Camponotus floridanus] | 8.0e-09 |
| pfu_aug2.0_60.1_00149.t1 | gi|328713795|ref|XP_003245180.1| | PREDICTED: COX assembly mitochondrial protein homolog [Acyrthosiphon pisum] | 1.0e-08 |
| pfu_aug2.0_60.1_00149.t1 | gi|524907980|ref|XP_005109099.1| | PREDICTED: ATP-dependent RNA helicase DDX54-like [Aplysia californica] | 5.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_60.1_00149.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_60.1_00149.t1 atggatatagccgatgaagatgatgatgaaaaaagtgatgatgatgatgacgatgtcaaggtcaaatcaaagaagtcaaa gccattacaaaattcgggaaaattcagtgttctaggaaccagaaataggaaatggcatacaaagaacaaagaggatcctg gagaggaaagctatcaaggcaaaggaaaaaggaaattcaagaaaggcaaaggaaaacgtgaacttaaaaggcccgagcag atactgaaagccagaaagataaaggctcacaaacaagctgtgcaaaaacatagacagaaaactgatcaatgcagaatgag cgacaaacagaatgacgatggcagtaagaaagcgtccagtctctttcgaatggacatgacagcaggacccatgggacttg gtgacccagaggacaggagcctgaggaaggcagagttacagttcttggtaggagatgtggtcagacgggaatcacagaaa gtatgtcatgaagagatgaaaggttttgcagactgtgcatcaaatgctggtttgggtgtattctggaaatgtgttgaaga gaaaaatatttataacaactgtttgctgaaatgaaggactggtgttagtaaaacagacatacgacacagaaaatataggg ctcaacgtgtagaggaagccaaagaaattctggaaaaagccaaattagcacgggaagaggcagaaaatgtgaatgtaacc tga |
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Protein
| Protein ID | pfu_aug2.0_60.1_00149.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_60.1_00149.t1 MDIADEDDDEKSDDDDDDVKVKSKKSKPLQNSGKFSVLGTRNRKWHTKNKEDPGEESYQGKGKRKFKKGKGKRELKRPEQ ILKARKIKAHKQAVQKHRQKTDQCRMSDKQNDDGSKKASSLFRMDMTAGPMGLGDPEDRSLRKAELQFLVGDVVRRESQK VCHEEMKGFADCASNAGLGVFWKCVEEKNIYNNCLLKXRTGVSKTDIRHRKYRAQRVEEAKEILEKAKLAREEAENVNVT |
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