Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_556.1_20902
Locus scaffold556.1 : 101414 ... 104625 : -
To GenomeBrowser scaffold556.1:101414..104625
Genes list of scaffold scaffold556.1
Synonym pfu_aug1.0_2710.1_08395

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_556.1_20902.t1 gi|675852870|ref|XP_009011995.1| hypothetical protein HELRODRAFT_168053 [Helobdella robusta] 9.0e-31
pfu_aug2.0_556.1_20902.t1 gi|675888398|ref|XP_009029701.1| hypothetical protein HELRODRAFT_181666 [Helobdella robusta] 4.0e-27

Transcript
Transcript IDpfu_aug2.0_556.1_20902.t1
Definition-
>pfu_aug2.0_556.1_20902.t1
atggcacttacaaatgccgaacgacaaaaaagatggagagaaaaacaaaaagagaagaacaaacaaggtttccttgccaa
agaaagagcaagaaagaaaaaaacttatgttagtgtagataaactgagtaagaaagatttagagaaaagaagaatggcag
gaagaaaaagagagaagaaatcttactatgtcagaaaggcacggaaatctttgaacaatggggaaaaattggtaacccac
acgagactcgttgtaagaatgccaccgttgaaaaagaaatataacagggccctacgaagagcaaatagagaactagaaga
acttcgtcaaaagaatggagagcttgagaaaagtaagaggaaaattcagaaaagatgcgaacgacttgtcaaaaccaacc
tcgattctacaatgaaccataataaaggctattcagctgacgagagttccatggctgaatcggagccccctacacctttg
actcctcgttcaaaggcagtccgtgatatgacaaaggacggtttaaacccaagagtacattcaactacacgacgcaggct
gatcgaagccaacgccacaattgctgccttctcgcctgcattgcgtcataaaaaaagtacaaagcgatctaatctgaatg
tcaacgttgatatcctaaagaaatataaatgtttgacgtccctcagtaggtcagttggggttactagaaggaaaatgaga
ttgttatcggtaaagagaaaacaaaacaacatcagaaagcgactgaataatgtggtcactacctttcttgaaagggagga
taacagtgttgtgttaccagggaagaaagatgtttctggaaagcaaaaggcacagaagagaattttatctgattacatgc
acaatctgcataagaaatttgagttagagaacccatctgtcagaatatcccgctcgtccttcagcaagatgaggtctagc
aacatgatgttagcttgtttttcaagtcgaaaaacttgtctttgctcaatccaccaaaacatggcgcttaaacttaaaag
tattcaaagtaaagtccatgtctcacagaatccagacgtaatggttcaacagtatccgacagaggaaagcttgactgatg
cattacaagaggggttaacagaaaaagtaaagttcaggaaatggaagaaattaaacgacggagaaaagtatagatggaaa
gaagtggaagaagaagtcaagaaagaagaatttatcgatttaatgaagaaagaagtgaaggtgttcagggaacatgttaa
cagagtaaaaactcagtattgcgagataaggaaactgagggaaaagttaccagagggagaggtcttactgtggatggact
tcgccgaaaattatacgtgttcctcattagaagaggtacaaagtgcctattggaatgcctccatggtcagtctccataca
atggtagtatatttccccaatggggatgtgaagagcgttgttggcgtgtccgatgtattgagtcataatgcaacggcgag
cggacatggaaagggcccgtgcgatggactcggagcgagcgtaaaacgttcagcagatatggcagttcgccaggggaaac
atagcatccaagatgccaatgatttcctctcctgggctagacactcggaagctacaggaagtaaggttacgtacctttat
tactcccaagatgattatgacaatacgatggagatgttgacgaagaaacaacaacctcaacccatctctggtactttcaa
actgcatgccgtggttccttacggaaacggaaagattgcaacacgaaacacaagttgttactgtgaaaaatgtatcacac
atgcttacactgattgtgggtgggagataaaagaaatttacaaaagtaaaccgagtacttcaacgtgttcaacttcaatt
tcttctattgacgatgagatacagagcgaaaacttggaaactgatgaaaaaaacccagaaatcggcgactttgtggctgc
ctgctatgaatcgaaatggtatatcggcaaggtattggagtatgatagccgagagaaagaaacaaaaataaattttatgg
agaagtctggaaaactcttgaatacgttcagatggccttctctgaaggatgaactgtggataccgactacggacatttta
atcataattcctcctccaacagcaacgggaaagtcttccagactttttaaattcgacaatatggtgattgatttgatcga
gaatcagttcaaaaaggcaaaaaagtag

Protein
Protein IDpfu_aug2.0_556.1_20902.t1
Definition-
>pfu_aug2.0_556.1_20902.t1
MALTNAERQKRWREKQKEKNKQGFLAKERARKKKTYVSVDKLSKKDLEKRRMAGRKREKKSYYVRKARKSLNNGEKLVTH
TRLVVRMPPLKKKYNRALRRANRELEELRQKNGELEKSKRKIQKRCERLVKTNLDSTMNHNKGYSADESSMAESEPPTPL
TPRSKAVRDMTKDGLNPRVHSTTRRRLIEANATIAAFSPALRHKKSTKRSNLNVNVDILKKYKCLTSLSRSVGVTRRKMR
LLSVKRKQNNIRKRLNNVVTTFLEREDNSVVLPGKKDVSGKQKAQKRILSDYMHNLHKKFELENPSVRISRSSFSKMRSS
NMMLACFSSRKTCLCSIHQNMALKLKSIQSKVHVSQNPDVMVQQYPTEESLTDALQEGLTEKVKFRKWKKLNDGEKYRWK
EVEEEVKKEEFIDLMKKEVKVFREHVNRVKTQYCEIRKLREKLPEGEVLLWMDFAENYTCSSLEEVQSAYWNASMVSLHT
MVVYFPNGDVKSVVGVSDVLSHNATASGHGKGPCDGLGASVKRSADMAVRQGKHSIQDANDFLSWARHSEATGSKVTYLY
YSQDDYDNTMEMLTKKQQPQPISGTFKLHAVVPYGNGKIATRNTSCYCEKCITHAYTDCGWEIKEIYKSKPSTSTCSTSI
SSIDDEIQSENLETDEKNPEIGDFVAACYESKWYIGKVLEYDSREKETKINFMEKSGKLLNTFRWPSLKDELWIPTTDIL
IIIPPPTATGKSSRLFKFDNMVIDLIENQFKKAKK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495