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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_551.1_04328
Locus scaffold551.1 : 215356 ... 241412 : +
To GenomeBrowser scaffold551.1:215356..241412
Genes list of scaffold scaffold551.1
Synonym pfu_aug1.0_15149.1_54150

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_551.1_04328.t1 1 1 Carb_anhydrase 33 286 0.0 168.4 0.0 0.0 168.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_551.1_04328.t1 gi|676433602|ref|XP_009046954.1| hypothetical protein LOTGIDRAFT_138561 [Lottia gigantea] 0.0
pfu_aug2.0_551.1_04328.t1 gi|189236706|ref|XP_974173.2| PREDICTED: carbonic anhydrase-related protein 10 [Tribolium castaneum] 0.0
pfu_aug2.0_551.1_04328.t1 gi|512891484|ref|XP_004922695.1| 0.0
pfu_aug2.0_551.1_04328.t1 gi|391330878|ref|XP_003739879.1| PREDICTED: putative carbonic anhydrase-like protein 1-like [Metaseiulus occidentalis] 0.0

Transcript
Transcript IDpfu_aug2.0_551.1_04328.t1
Definition-
>pfu_aug2.0_551.1_04328.t1
atggtattaatgtctggatctgtgtctgattcctgggacaaatggtggagctacggtggagtgtcaggatctgtgtctga
ttcctgggacaaatggtggagctacggtggagtatcagggcctacattctgggcgttacagaattctgattggcggatgt
gtagtcatgggaagcaacagtctcctatcaatatatctccggagcttcttctgtacgacccaaatctagggcatatctct
ttgaatatatccaatggaagcggtcaattggtaaatactggaaatgacatcactctttttctccaagatggtggattgca
tagagtcaacgtaacagacggccctttgtcatatgtatatgccatttcagatatcaagtttcactttggtcgccctgggc
atgcgcgttcagagcatcagattagtaataagacatttcctgctgagctacagtttcggggatataaccgtgatgtttat
gataacttcaaggacgcagagaaagccgtgcgtggaatcgttgtcataacagcatttattgaaatagggttcccatcaaa
taacgcttttgacatcatcaacaagaacttaagatacattcaacggcgaggaaatgtgaccaatattgatagtcttccag
tgagtgatctcattcctttaacagatgaatatatgacgtacgagggctcactaacacaacctggctgccatgaaagcgtc
acctggattatccttaataagcctgtatttgtaacacgtaatcagttcgaaatgtttcaaaaagaggcaaacatggaatg
gagaaaaaacaacgctcgacccatacagccattaaaccagagggtgatccgaactaatatcaataccaaagtaaagcaga
atagtatatgcaccatcgaaaagcaataccgttatcaattaaacgacctatttttgtcctga

Protein
Protein IDpfu_aug2.0_551.1_04328.t1
Definition-
>pfu_aug2.0_551.1_04328.t1
MVLMSGSVSDSWDKWWSYGGVSGSVSDSWDKWWSYGGVSGPTFWALQNSDWRMCSHGKQQSPINISPELLLYDPNLGHIS
LNISNGSGQLVNTGNDITLFLQDGGLHRVNVTDGPLSYVYAISDIKFHFGRPGHARSEHQISNKTFPAELQFRGYNRDVY
DNFKDAEKAVRGIVVITAFIEIGFPSNNAFDIINKNLRYIQRRGNVTNIDSLPVSDLIPLTDEYMTYEGSLTQPGCHESV
TWIILNKPVFVTRNQFEMFQKEANMEWRKNNARPIQPLNQRVIRTNINTKVKQNSICTIEKQYRYQLNDLFLS

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