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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_551.1_04327
Locus scaffold551.1 : 163255 ... 183050 : +
To GenomeBrowser scaffold551.1:163255..183050
Genes list of scaffold scaffold551.1
Synonym pfu_aug1.0_13271.1_25148

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_551.1_04327.t1 1 1 Carb_anhydrase 49 180 6.1e-32 110.6 6.2e-36 9.2e-32 110.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_551.1_04327.t1 gi|751786074|ref|XP_011202401.1| PREDICTED: carbonic anhydrase-related protein 10 [Bactrocera dorsalis] 2.0e-33
pfu_aug2.0_551.1_04327.t1 gi|755976152|ref|XP_011307859.1| PREDICTED: carbonic anhydrase-related protein 10 [Fopius arisanus] 5.0e-33
pfu_aug2.0_551.1_04327.t1 gi|195041761|ref|XP_001991311.1| GH12585 [Drosophila grimshawi] 7.0e-33
pfu_aug2.0_551.1_04327.t1 gi|221329761|ref|NP_572407.3| CG1402, isoform B [Drosophila melanogaster] 1.0e-32
pfu_aug2.0_551.1_04327.t1 gi|751476342|ref|XP_011193652.1| PREDICTED: carbonic anhydrase-related protein 10 [Bactrocera cucurbitae] 1.0e-32

Transcript
Transcript IDpfu_aug2.0_551.1_04327.t1
Definition-
>pfu_aug2.0_551.1_04327.t1
atgtccgaaactttggataaatggtggacttacgacggattgtcagggacggaaatcccatcgtatcaaagatactcatc
aaaactagctgtaacttgtctgaggagactatttccctgcaaagggtgcattcagattagaggatataaccgtgacgtat
acagatcatacaatgacgcggtgacgtcagttagaggaatcgtcatacttgctgtttttgtagagattggtcaagaaaga
aatcctgcctacgagattctgaacgaaatccttccattgataaaacatagagggaacagaacatcactacgcaattttcc
tatccattttctgatgtctaatactgatgaatacatgacgtatgagggctccttaacacagcctggttgtcaagaaagcg
ttacttggattatattaaatactccagtatttgtcacggaggaacagttgaaggtctttcaaaatgaagcatcgatggaa
tggcataaaaacaatgcacgaccattacaatccttgaaccatcgagttatacgaacaaatatacaccatagatcaaagaa
gtcttccagtaagtgtccgatagaaaagaaaattcaatacgaagttaatgccatgtataaatcctga

Protein
Protein IDpfu_aug2.0_551.1_04327.t1
Definition-
>pfu_aug2.0_551.1_04327.t1
MSETLDKWWTYDGLSGTEIPSYQRYSSKLAVTCLRRLFPCKGCIQIRGYNRDVYRSYNDAVTSVRGIVILAVFVEIGQER
NPAYEILNEILPLIKHRGNRTSLRNFPIHFLMSNTDEYMTYEGSLTQPGCQESVTWIILNTPVFVTEEQLKVFQNEASME
WHKNNARPLQSLNHRVIRTNIHHRSKKSSSKCPIEKKIQYEVNAMYKS

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