Gene
| Gene Model ID | pfu_aug2.0_5325.1_19415 |
|---|---|
| Locus | scaffold5325.1 : 12186 ... 19610 : + |
| To GenomeBrowser | scaffold5325.1:12186..19610 |
| Genes list of scaffold | scaffold5325.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5325.1_19415.t1 | 1 | 1 | Clat_adaptor_s | 1 | 138 | 6.5e-33 | 113.4 | 2.5e-36 | 7.3e-33 | 113.2 |
| pfu_aug2.0_5325.1_19415.t1 | 1 | 1 | AP-5_subunit_s1 | 47 | 118 | 1.3e-07 | 31.7 | 5.4e-11 | 1.6e-07 | 31.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5325.1_19415.t1 | gi|704543584|ref|XP_010177458.1| | PREDICTED: AP-4 complex subunit sigma-1 [Mesitornis unicolor] | 1.0e-38 |
| pfu_aug2.0_5325.1_19415.t1 | gi|723138998|ref|XP_010286318.1| | PREDICTED: AP-4 complex subunit sigma-1 [Phaethon lepturus] | 1.0e-38 |
| pfu_aug2.0_5325.1_19415.t1 | gi|704175312|ref|XP_010133325.1| | PREDICTED: AP-4 complex subunit sigma-1 [Buceros rhinoceros silvestris] | 2.0e-38 |
| pfu_aug2.0_5325.1_19415.t1 | gi|524999176|ref|XP_005047336.1| | PREDICTED: AP-4 complex subunit sigma-1 isoform X1 [Ficedula albicollis] | 2.0e-38 |
| pfu_aug2.0_5325.1_19415.t1 | gi|700342648|ref|XP_009915162.1| | PREDICTED: AP-4 complex subunit sigma-1 [Haliaeetus albicilla] | 2.0e-38 |
Transcript
| Transcript ID | pfu_aug2.0_5325.1_19415.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5325.1_19415.t1 atgatcaagttcttattgatatcaaacaaccaggcaaaacttcgcttgagtcgcttctttggaaagcacaactatactgg tgagaagcaacgtgaacttatcaaggcttgtttgaagcaaagtaaacaggagggactgatagagacagaagaagatgttg tggtatacagagtgtttgccaacctgatcttcatcctggctatcacagaagatgagaatgagcttgcagccttggagttc cttctaaactttgtggagacaatgcagaaatattttgagaaaatttcagagatggatctgctatttaacatggatcgagt ccacatgattttggacgagatgatatctaatggatgtgtatcagagaccaataggaacagaattcttgtgccgttaaatt taatggacgcagcgaaaaaataa |
|
Protein
| Protein ID | pfu_aug2.0_5325.1_19415.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5325.1_19415.t1 MIKFLLISNNQAKLRLSRFFGKHNYTGEKQRELIKACLKQSKQEGLIETEEDVVVYRVFANLIFILAITEDENELAALEF LLNFVETMQKYFEKISEMDLLFNMDRVHMILDEMISNGCVSETNRNRILVPLNLMDAAKK |
|