Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_531.1_04294
Locus scaffold531.1 : 10636 ... 33967 : +
To GenomeBrowser scaffold531.1:10636..33967
Genes list of scaffold scaffold531.1
Synonym pfu_aug1.0_2473.1_44385

Manual annotation
Annotation by Blast2GO
Annotation GO
kinesin-like protein kif28p-like GO:0005488

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_531.1_04294.t1 3 1 Kinesin 7 331 0.0 334.1 0.0 0.0 334.1
pfu_aug2.0_531.1_04294.t1 3 2 Kinesin 400 427 0.0 334.1 3.0 8800.0 -5.0
pfu_aug2.0_531.1_04294.t1 2 1 FHA 465 526 1.1e-14 54.2 1.8e-10 5.4e-07 29.6
pfu_aug2.0_531.1_04294.t1 2 2 FHA 524 572 1.1e-14 54.2 2.1e-09 6.3e-06 26.2
pfu_aug2.0_531.1_04294.t1 3 1 KIF1B 692 734 2.2e-26 91.6 3.3e-15 9.8e-12 44.7
pfu_aug2.0_531.1_04294.t1 3 2 KIF1B 820 862 2.2e-26 91.6 3.3e-15 9.8e-12 44.7
pfu_aug2.0_531.1_04294.t1 3 3 KIF1B 905 921 2.2e-26 91.6 1.0 3000.0 -1.7
pfu_aug2.0_531.1_04294.t1 3 3 Kinesin 1063 1092 0.0 334.1 0.77 2300.0 -3.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_531.1_04294.t1 gi|524871056|ref|XP_005092304.1| PREDICTED: kinesin-like protein KLP6-like isoform X1 [Aplysia californica] 0.0
pfu_aug2.0_531.1_04294.t1 gi|156388017|ref|XP_001634498.1| predicted protein [Nematostella vectensis] 0.0
pfu_aug2.0_531.1_04294.t1 gi|585666342|ref|XP_006817089.1| PREDICTED: kinesin-like protein KIF28P-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_531.1_04294.t1 gi|585653777|ref|XP_006815172.1| PREDICTED: kinesin-like protein KIF28P-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_531.1_04294.t1 gi|196000711|ref|XP_002110223.1| hypothetical protein TRIADDRAFT_23272 [Trichoplax adhaerens] 0.0

Transcript
Transcript IDpfu_aug2.0_531.1_04294.t1
Definition-
>pfu_aug2.0_531.1_04294.t1
atgtcgggtaatacgacgatcatcaagaatcctgaaaacatgtcatcggagggtaagaggtttgcctttgattactccta
ctggtcacatgatgacttcaatgacagaggggatgggtactttgagccagccagcagtaaatatgcagatcagcaaagag
tatttgatgaccttggtaagggagtgttggacaatgcatggaaggggtacaattgttcgctgtttgcctatggacagact
ggtagtgggaagtcatattccgtaatgggttatggtaacaataaaggcattgtgcctatgttctgtgacgagctgttcaa
gggtgtggaaggtaaacggagtacggcaaaggaagatgaagaataccaggttaccttcagtatgttggagatctacaatg
agcaagtccgagacctgctgaatgccaagtcaatgtcagtcaaaggaggtctgaaggtcagacagagtcctaataaaggg
ttctatgttgagtccctagtatcctgtccagtaaacagcttcaaggaaatagaaaacaaaatcaatgaaggtaacaggaa
caggactgtggctgcaaccaatatgaatgccacaagcagtcgagctcacaccatagtggctataacatttgttcagaaga
cgcccaatgagaccggtcaaagtatgacaaggacatctagtgttaaccttgttgatttggctggcagtgagagagctgac
tctacaggtgctactggtgacagactgaaggaggggtcagcaatcaaccaatcactgagcagtctgggtaatgtcatcag
tgctctagctgaccaatcaactggcaagaaaaaagttgtggtcccctacagagactctgtgttaaccaaactacttcaaa
atgccctcggtggaaatagtaaaactataatgatagccgccctgagtcctgctgatatcaactatgatgagactctatca
actctacgctttgctgatagagccaaagctatcaagacgacagctacagttaacgagagtcccaccgacaagcttatacg
agaactgagagaggaaaacgctcgactgatggagatgattcagacgggcggtgtggtcctgccaccagatggcgctggag
gtggtggtggaggtggctactctaaagatgaggtagaggagatgaagagacagctggaagaggaactgaaagcaaatcaa
gaagaaatggagaatatgaaaaagtcctgggaacagaggatgaaagagaaagaacaggataatcagacacaaatgaaaga
ggaaagtcagaaagaggcagataagaaggtgattccccatttctggaatttgaatgaggatcctgtattgacagccatgg
tggtacactttgctaaacaaggtgtatcaaaagttggaagtaagaaagcccagcccccaccagatatacagattaatgga
ctcagtataagtgcacaacatgctaccgtaacaaacaaagacaacaaagtgacactgaaacccggcgatggtgttaaaat
ccttgtgaacggcacaaaagttctcaaagagacagaattacatcataatgacagtataagtgcacaacatgctaccgtaa
caaacaaggacaacaaagtgacactgaaacctggcgatggtgttaaaatcctcgtgaacggcacaaaagttctcaaagag
acagaattacatcataatgacagggttttgtttggtccaaaccacctgtatgtgttccaccacccccaggacatggctaa
aatgatgaaggaggggaagcaggtagataccccaacatatgaccacgcccaggaggaaattgcccaaaaggctggattca
tgaacaaagagggaaagtcagaagaggatattgttctgcaagaggatgtgattcagatgttacctatggtgaatgaggct
gatgctatgtctgctgaactggataaaaaagtcaagtttgagctggccctagtgtcgccccaggctagaggtctcagaga
agggaagactgaggtgatggtcaaaatgaggcagctggagacagggaatgaatggatgtgggacaggaataaattcatca
atagaaaatttctgatgcaagagatgtaccagaattatgtagagggggcagatgactgggatgtaccaagggataaggac
ccattctgggaaccagcagacgctgaggtattgataggcacggtaaatctccatctgttctcactcggacataaactgga
cgcagaggaaaccctgaccatcaccaactaccagggaaaagaacaagcattcttaatacatgtatgtagaatgagaagaa
caactaaaatgttacaagtaacaacggagagtgaagttgtgcccaaatattcatcattcaaaagtgaatatgccagggtg
atggtcaaaatgaggcagctggagacagggaatgaatggatgtgggacaggaataaattcatcaatagaaaatttctgat
gcaagagatgtaccagaattatgtagagggggcagatgactgggatgtaccaagggataaggacccattctgggaaccag
cagacgctgaggtattgataggcacggtaaatctccatctgttctcactcggacataaactggacgcagaggaaaccctg
accatcaccaactaccagggaaaagaacaaggtcacttggatcttcatgttataccaaccaatagtaaaggaggacagtt
agaagaagatgattttgtggaggatgctgaagaattgattgggaagccgttatacttcaatttcaagataaattttgcca
gaggtctacctcagaatattgcaaagagtttttgtaagttcaaattttacctggatgacaagcatgcagaaaccgctgaa
gttgacggcatgaatcctacatttgatttctctaagatgttcaagtatgataaggttacaaaacagtttaaggagtattt
ggctgaagatgctgtggtgatagaggtatggggcagacagaaaggggaggggctgaaaagtggcggcaaactgacccctg
ggggtgtctcaaccaaacaaatgatggaacgagaaaaatctaatgtgactccagacgccaaacctgcagccaagggaggt
aataagaaacctgacaacaacaacctggctgttcctgccgcaacagccgctgcagcaacaaagcaacaagacaacaagca
gatgacggagcagataaatacatacaaacagaaagctgaccaagccgaaaacaaggcagcaacctcagaggcaaaagctc
aaaattacaagaaaactctggatggtgtacattctctgttgaaacagaagaagtccggtggagcaacaactattacgatt
tctgagttagaagcaatccttaatgaccccagtgcagcacgtagtgagaacatgggagagaatgcatcaaaggcctgtag
tattcaataa

Protein
Protein IDpfu_aug2.0_531.1_04294.t1
Definition-
>pfu_aug2.0_531.1_04294.t1
MSGNTTIIKNPENMSSEGKRFAFDYSYWSHDDFNDRGDGYFEPASSKYADQQRVFDDLGKGVLDNAWKGYNCSLFAYGQT
GSGKSYSVMGYGNNKGIVPMFCDELFKGVEGKRSTAKEDEEYQVTFSMLEIYNEQVRDLLNAKSMSVKGGLKVRQSPNKG
FYVESLVSCPVNSFKEIENKINEGNRNRTVAATNMNATSSRAHTIVAITFVQKTPNETGQSMTRTSSVNLVDLAGSERAD
STGATGDRLKEGSAINQSLSSLGNVISALADQSTGKKKVVVPYRDSVLTKLLQNALGGNSKTIMIAALSPADINYDETLS
TLRFADRAKAIKTTATVNESPTDKLIRELREENARLMEMIQTGGVVLPPDGAGGGGGGGYSKDEVEEMKRQLEEELKANQ
EEMENMKKSWEQRMKEKEQDNQTQMKEESQKEADKKVIPHFWNLNEDPVLTAMVVHFAKQGVSKVGSKKAQPPPDIQING
LSISAQHATVTNKDNKVTLKPGDGVKILVNGTKVLKETELHHNDSISAQHATVTNKDNKVTLKPGDGVKILVNGTKVLKE
TELHHNDRVLFGPNHLYVFHHPQDMAKMMKEGKQVDTPTYDHAQEEIAQKAGFMNKEGKSEEDIVLQEDVIQMLPMVNEA
DAMSAELDKKVKFELALVSPQARGLREGKTEVMVKMRQLETGNEWMWDRNKFINRKFLMQEMYQNYVEGADDWDVPRDKD
PFWEPADAEVLIGTVNLHLFSLGHKLDAEETLTITNYQGKEQAFLIHVCRMRRTTKMLQVTTESEVVPKYSSFKSEYARV
MVKMRQLETGNEWMWDRNKFINRKFLMQEMYQNYVEGADDWDVPRDKDPFWEPADAEVLIGTVNLHLFSLGHKLDAEETL
TITNYQGKEQGHLDLHVIPTNSKGGQLEEDDFVEDAEELIGKPLYFNFKINFARGLPQNIAKSFCKFKFYLDDKHAETAE
VDGMNPTFDFSKMFKYDKVTKQFKEYLAEDAVVIEVWGRQKGEGLKSGGKLTPGGVSTKQMMEREKSNVTPDAKPAAKGG
NKKPDNNNLAVPAATAAAATKQQDNKQMTEQINTYKQKADQAENKAATSEAKAQNYKKTLDGVHSLLKQKKSGGATTITI
SELEAILNDPSAARSENMGENASKACSIQ

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495