Gene
| Gene Model ID | pfu_aug2.0_508.1_27481 |
|---|---|
| Locus | scaffold508.1 : 195 ... 1766 : + |
| To GenomeBrowser | scaffold508.1:195..1766 |
| Genes list of scaffold | scaffold508.1 |
| Synonym | pfu_aug1.0_210550.1_28637 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_508.1_27481.t1 | 1 | 1 | DUF258 | 22 | 91 | 1.5e-06 | 27.4 | 1.9e-09 | 3.9e-06 | 26.1 |
| pfu_aug2.0_508.1_27481.t1 | 1 | 1 | FeoB_N | 22 | 90 | 9.0e-06 | 25.0 | 8.9e-09 | 1.9e-05 | 23.9 |
| pfu_aug2.0_508.1_27481.t1 | 2 | 1 | AIG1 | 23 | 216 | 0.0 | 157.9 | 0.0 | 0.0 | 157.9 |
| pfu_aug2.0_508.1_27481.t1 | 1 | 1 | MMR_HSR1 | 23 | 126 | 5.8e-09 | 35.9 | 9.6e-12 | 2.0e-08 | 34.1 |
| pfu_aug2.0_508.1_27481.t1 | 2 | 2 | AIG1 | 273 | 332 | 0.0 | 157.9 | 2.9 | 6100.0 | -4.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_508.1_27481.t1 | gi|593766875|ref|XP_007121945.1| | PREDICTED: GTPase IMAP family member 4 [Physeter catodon] | 3.00004e-41 |
| pfu_aug2.0_508.1_27481.t1 | gi|470658360|ref|XP_004331139.1| | PREDICTED: GTPase IMAP family member 4-like [Tursiops truncatus] | 8.99998e-41 |
| pfu_aug2.0_508.1_27481.t1 | gi|744545754|ref|XP_010997865.1| | PREDICTED: GTPase IMAP family member 4 [Camelus dromedarius] | 3.0e-40 |
Transcript
| Transcript ID | pfu_aug2.0_508.1_27481.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_508.1_27481.t1 atgaataacagaactgttgtttttatagatgtcaaaaagcaggcacagtcaacggaagaggaaataagaatagtcctgct tgggaaaactggcgccggcaagagttcaactggtaatcttttactcggagcaagaaaatttcagacggggttttcaccga tttctgtttctaaacaatgtggtcgtgaagaggtcactaaaaatgataagaaatatatcataatagacactccagggttt tttgacacaagagatattgataaggaccagttaaatgcagaaatattgcgctgcattagcctaacttcgcctggacccca tgtgcttttatatattcaagcaccaaatagatgtaccgaggaggaggaaagcagcattcaagattttttaaaagtctttg gggaagatgcctgtaagcatatgattctagtctacgtaagaaaggatgaatttgaacgaaataaagagactttcgaaaac tacctgaaaaagttgccaaagttctggaccaaattcattagcatgtgtgagaatagagttctctgcattaaaaacaacaa tattgaatccacagaagcagaatgtctgcgttcagaaatagacaaacttgtgtcgaaaaataagagaaactatttctatc atgatttttctatcggaaagaaaatgtatcttgattccggtgaaaaaatattttcctctgatgaagacaaagggagcaag aaacaattcgcgtcaacctcaaagaacatggaagaaaaaatggagaaaaacgttcaatatttagacatatatcaagcaga caaggaaattgaatttctaaaaaatcagctgtcccgcaaacaagaagaattaaagcaaatgcaaaaagatcacgatgaaa gattatggcaaacagaagaaagggcacgatccaactttgaaagtgagatatcccgcaaacaagaagaattaaagcaaatg caaaaagaacacgatgaaagattatggcaaacagaaagggcacgatccaactttgaaagtgagctaagaagacgtgaggc ggaatgtcaaagattacaagcacaattggaaacagagcgtagaagacgtgaggcggaatctcaaagattacgagcacgat ttgaaagagaaatgagggatagtaggttttcttttctttga |
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Protein
| Protein ID | pfu_aug2.0_508.1_27481.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_508.1_27481.t1 MNNRTVVFIDVKKQAQSTEEEIRIVLLGKTGAGKSSTGNLLLGARKFQTGFSPISVSKQCGREEVTKNDKKYIIIDTPGF FDTRDIDKDQLNAEILRCISLTSPGPHVLLYIQAPNRCTEEEESSIQDFLKVFGEDACKHMILVYVRKDEFERNKETFEN YLKKLPKFWTKFISMCENRVLCIKNNNIESTEAECLRSEIDKLVSKNKRNYFYHDFSIGKKMYLDSGEKIFSSDEDKGSK KQFASTSKNMEEKMEKNVQYLDIYQADKEIEFLKNQLSRKQEELKQMQKDHDERLWQTEERARSNFESEISRKQEELKQM QKEHDERLWQTERARSNFESELRRREAECQRLQAQLETERRRREAESQRLRARFEREMRDSRFSFL |
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