Gene
| Gene Model ID | pfu_aug2.0_4973.1_12735 |
|---|---|
| Locus | scaffold4973.1 : 1 ... 3835 : - |
| To GenomeBrowser | scaffold4973.1:1..3835 |
| Genes list of scaffold | scaffold4973.1 |
| Synonym | pfu_aug1.0_11209.1_39159 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4973.1_12735.t1 | 1 | 1 | Syja_N | 49 | 137 | 4.7e-07 | 28.8 | 3.7e-11 | 5.4e-07 | 28.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4973.1_12735.t1 | gi|676487367|ref|XP_009064270.1| | hypothetical protein LOTGIDRAFT_131084 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4973.1_12735.t1 | gi|729734041|ref|XP_010562981.1| | PREDICTED: phosphatidylinositide phosphatase SAC2 isoform X1 [Haliaeetus leucocephalus] | 2.0e-37 |
| pfu_aug2.0_4973.1_12735.t1 | gi|585683874|ref|XP_006812488.1| | PREDICTED: LOW QUALITY PROTEIN: phosphatidylinositide phosphatase SAC2-like [Saccoglossus kowalevskii] | 6.0e-37 |
| pfu_aug2.0_4973.1_12735.t1 | gi|512856264|ref|XP_002940391.2| | PREDICTED: phosphatidylinositide phosphatase SAC2 [Xenopus (Silurana) tropicalis] | 6.0e-36 |
| pfu_aug2.0_4973.1_12735.t1 | gi|573885863|ref|XP_006630796.1| | PREDICTED: phosphatidylinositide phosphatase SAC2-like [Lepisosteus oculatus] | 7.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_4973.1_12735.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4973.1_12735.t1 atgtcccagttgtttcagacagaggatcactatattttgcatgaaggacagcattcattgtggtgttcacggcataatgg aacaattgaagccaagaaaggagatgatatatgttctgcttggaatcctgtttgtataggactggtatatggacttattg gaaaaataaagatacaccctgatgaagaatggcgccttcttctcattaaggaaaggtcattggtcgggaggattgcagag aaacatgaagtttacagaattaacaagatagttattataccgttatcttcagcagaaccccaggagctggatctagacgt aaaattctctctgaaatacattcctcttgagatttctcacatgcacagtgattcaagtaaaacaatttaccattgttggt actatactgtgagcaaattgagatgtcaagttcaccattttggcataaggaaaaatcagaccatttcacaaacaggtgga agtcaacgacagttacagaacgcatggaaaactataaaaactggggtggacatagtgaaaactagaaaa |
|
Protein
| Protein ID | pfu_aug2.0_4973.1_12735.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4973.1_12735.t1 MSQLFQTEDHYILHEGQHSLWCSRHNGTIEAKKGDDICSAWNPVCIGLVYGLIGKIKIHPDEEWRLLLIKERSLVGRIAE KHEVYRINKIVIIPLSSAEPQELDLDVKFSLKYIPLEISHMHSDSSKTIYHCWYYTVSKLRCQVHHFGIRKNQTISQTGG SQRQLQNAWKTIKTGVDIVKTRK |
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