Gene
| Gene Model ID | pfu_aug2.0_485.1_17477 |
|---|---|
| Locus | scaffold485.1 : 150913 ... 178558 : + |
| To GenomeBrowser | scaffold485.1:150913..178558 |
| Genes list of scaffold | scaffold485.1 |
| Synonym | pfu_aug1.0_1014.1_65739 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_485.1_17477.t1 | 1 | 1 | DUF3808 | 110 | 561 | 0.0 | 485.5 | 0.0 | 0.0 | 484.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_485.1_17477.t1 | gi|676433318|ref|XP_009046861.1| | hypothetical protein LOTGIDRAFT_138416 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_485.1_17477.t1 | gi|524880517|ref|XP_005096921.1| | PREDICTED: tetratricopeptide repeat protein 39B-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_485.1_17477.t1 | gi|260792880|ref|XP_002591442.1| | hypothetical protein BRAFLDRAFT_205333 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_485.1_17477.t1 | gi|260792890|ref|XP_002591447.1| | hypothetical protein BRAFLDRAFT_205266 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_485.1_17477.t1 | gi|291236436|ref|XP_002738146.1| | PREDICTED: tetratricopeptide repeat protein 39B-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_485.1_17477.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_485.1_17477.t1 atgcttataaaaccacctcgagaacacagttccgagaaatcacaaaccattactgaatatctgaactgctccactccgga aattccatacagtaccgtaccgttaaggactctgtgttttaagtttttagttaggaaaatcggaatatggcaacacaaga agaagtcgaagatagcgagatatttgaagatgctgaggaatcagttccaatatagtaaacaaacctacacgtggggaacg aattttggnaagatatttgaagatgctgaggaatcagttccaatgtcatgtgacatggaccttgctgatatgatagagca ggctaaaatggcgctacgactcttccttaataacagattctcagaggcaaaagaaagaatgaaaccattgtctgagtcca gtatgtatcactcccttggatacggtaccatcctctacttacaggctgtcatgacatttgatatgacagatatagaagtt gccatacaggccatgaagaagtccataaatgtgtgtagcaaattcagacgaaaatacagcatgctgcagagtttgtccaa ggtggcatcaaagattgactataataacttgtcagaggaggagacccacgctgagctatgttatgctgaatgcctcttgt tacgggctttactcacattcatacaagatgagaatctaattagctttgtcaagggtggactgaagatcagagagtgctac aaaatatataaagaatgtaataagatgctacagaacagagatttcaccatggatcaagaaaaagttcattttgaaagtgg agttaaaatgggaataggagggtttaatttaatgatatcattgcttccaagtaaaattttgaagcttctagaatttgttg gattctcagggaataagagacatggacttcgtaatctcaaagacggcagtgataatctaaacagtctgcgaggccctctg tgttcaatagtcttgatagcatatcatactgtagtgtgttatgttttaggtttagctgatggtgacatagatcttgcaga tcagttattacagccttgcttaaaagattatcctaagggtgctttgtttttattttttgccggaaggatagaggaagtgc gcggaaatataaatgaggctgtggtaaagtttgaggaatctatagattctcagcaggagtggagacaatttcatcatctg tgtttctgggagctcatgtggtgtcattgtttccgtggtgattggttaatggcaatgaagtatgcagagaagctgtgcaa ggagagtcgctggagcaaggcaacctatacataccaaaaggcagcattcctaatgatgtgtgacgaccaaacagaggaaa caaaagctcatatcaaatacttgtttggggaagttcccagaatgaaacaaagaatagcagggaagtctttaccaatagaa aaatttgctgtacataaagtgaagagaatcttagatcatcaaaccgacttggtgcttccagcattagaattagtgtatgt ttggaatggatttagtataattggaaagaaggatggactgctggatccagtattagctattgtggagaaaaccgtgacca acatcacagaaaataaaggagcttacaagttttaccatgatgactacagcttggcaatactactgaaaggggtgtgtctg aaatggaagggaagactcatgcaggcagaacaatgcttcaaggaagtccttgagaatgagaagaggttaaagctggatac atatctagtgccgtatgccactgtagaaatggcaatgctgagtctacagatgaacaacactaaagattgcaagaaatatt tagattgtgccaatgagaagaagttaaagctggatacatatctagtgccatatgccactgtagaaatggcaatgctgagt ctacagatggacaacactaaagattgcaagaaatacttagattgtgccaagaaaaactacaaaggttacctgttggagtc tcgcttacacttccgtatccatgctatcaggctacagcttagttcagcaggtgttagtgagggcagtgaaggggggataa caccacaagaggaggatagtacaggaggctttaacacagatggagtgatgaaccatagtggaaatgacagacaaaacaat gtagaaacagatcttccctcggctgtagaaagtgtcaaactttga |
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Protein
| Protein ID | pfu_aug2.0_485.1_17477.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_485.1_17477.t1 MLIKPPREHSSEKSQTITEYLNCSTPEIPYSTVPLRTLCFKFLVRKIGIWQHKKKSKIARYLKMLRNQFQYSKQTYTWGT NFXKIFEDAEESVPMSCDMDLADMIEQAKMALRLFLNNRFSEAKERMKPLSESSMYHSLGYGTILYLQAVMTFDMTDIEV AIQAMKKSINVCSKFRRKYSMLQSLSKVASKIDYNNLSEEETHAELCYAECLLLRALLTFIQDENLISFVKGGLKIRECY KIYKECNKMLQNRDFTMDQEKVHFESGVKMGIGGFNLMISLLPSKILKLLEFVGFSGNKRHGLRNLKDGSDNLNSLRGPL CSIVLIAYHTVVCYVLGLADGDIDLADQLLQPCLKDYPKGALFLFFAGRIEEVRGNINEAVVKFEESIDSQQEWRQFHHL CFWELMWCHCFRGDWLMAMKYAEKLCKESRWSKATYTYQKAAFLMMCDDQTEETKAHIKYLFGEVPRMKQRIAGKSLPIE KFAVHKVKRILDHQTDLVLPALELVYVWNGFSIIGKKDGLLDPVLAIVEKTVTNITENKGAYKFYHDDYSLAILLKGVCL KWKGRLMQAEQCFKEVLENEKRLKLDTYLVPYATVEMAMLSLQMNNTKDCKKYLDCANEKKLKLDTYLVPYATVEMAMLS LQMDNTKDCKKYLDCAKKNYKGYLLESRLHFRIHAIRLQLSSAGVSEGSEGGITPQEEDSTGGFNTDGVMNHSGNDRQNN VETDLPSAVESVKL |
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