Gene
| Gene Model ID | pfu_aug2.0_481.1_04244 |
|---|---|
| Locus | scaffold481.1 : 305103 ... 309686 : - |
| To GenomeBrowser | scaffold481.1:305103..309686 |
| Genes list of scaffold | scaffold481.1 |
| Synonym | pfu_aug1.0_10996.1_46299 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_481.1_04244.t1 | 2 | 1 | Lectin_C | 27 | 134 | 3.9e-13 | 49.9 | 1.6e-16 | 2.4e-12 | 47.4 |
| pfu_aug2.0_481.1_04244.t1 | 2 | 2 | Lectin_C | 170 | 194 | 3.9e-13 | 49.9 | 0.0063 | 93.0 | 3.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_481.1_04244.t1 | gi|676474336|ref|XP_009060114.1| | hypothetical protein LOTGIDRAFT_229000 [Lottia gigantea] | 8.0e-19 |
| pfu_aug2.0_481.1_04244.t1 | gi|524872250|ref|XP_005092888.1| | PREDICTED: neurocan core protein-like [Aplysia californica] | 1.0e-18 |
| pfu_aug2.0_481.1_04244.t1 | gi|524889324|ref|XP_005101221.1| | PREDICTED: uncharacterized protein LOC101860107 [Aplysia californica] | 3.0e-17 |
| pfu_aug2.0_481.1_04244.t1 | gi|524881334|ref|XP_005097319.1| | PREDICTED: C-type lectin domain family 4 member F-like [Aplysia californica] | 3.0e-13 |
| pfu_aug2.0_481.1_04244.t1 | gi|676441700|ref|XP_009049575.1| | hypothetical protein LOTGIDRAFT_238723 [Lottia gigantea] | 5.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_481.1_04244.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_481.1_04244.t1 aaggtgcagtatcatcatgccctaaggacaacttcggatgggcactagataatttctgctatgagatagtgttcaaagac tacagttggtacaacgctagaaattactgcgccagtcgtggcggtgatttggcggaaattcgtacgcagcgcatacaaga ttcagttgtacaacatcttaaaatgaataacggtggtagaaatggattctggttcggtgccacagacagtgacaacgaag gacattggttatggttacacagtcccagaggcatgccctactcatattggaatccctctcagggaccaaatgatcacgga tttttcattggtggatctcttgaggactgtgccatgataaggaccgacgatggttacagatggcatgatggtccatgtga tggacttattgataatctatcatattccttcatatgtcagtatgattacaagccaattccaaaagcgacaacgataaagt ggctgacacaaaaaccaacaacgcagaaaccaacgacttacgtatggacaactcaaaaaccaacgacttacgtttggaca acaaacaaacctacgacatacgaatggacaacccaaaaaccaacaacaacgaccgcctctggcataatcattggataa |
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Protein
| Protein ID | pfu_aug2.0_481.1_04244.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_481.1_04244.t1 GAVSSCPKDNFGWALDNFCYEIVFKDYSWYNARNYCASRGGDLAEIRTQRIQDSVVQHLKMNNGGRNGFWFGATDSDNEG HWLWLHSPRGMPYSYWNPSQGPNDHGFFIGGSLEDCAMIRTDDGYRWHDGPCDGLIDNLSYSFICQYDYKPIPKATTIKW LTQKPTTQKPTTYVWTTQKPTTYVWTTNKPTTYEWTTQKPTTTTASGIIIG |
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