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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_4740.1_02656
Locus scaffold4740.1 : 6025 ... 23625 : -
To GenomeBrowser scaffold4740.1:6025..23625
Genes list of scaffold scaffold4740.1
Synonym pfu_aug1.0_7484.1_09580

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_4740.1_02656.t1 2 1 Death 30 113 7.8e-11 41.5 5.9e-07 0.00098 18.8
pfu_aug2.0_4740.1_02656.t1 2 2 Death 140 223 7.8e-11 41.5 2.0e-07 0.00033 20.3

Transcript
Transcript IDpfu_aug2.0_4740.1_02656.t1
Definition-
>pfu_aug2.0_4740.1_02656.t1
atgggaaatcagacaagtaaaagaacaaagcctcccactttgaaacaagtcgacaagaacagatgcaaagtgatagtgac
tgagaaattcctcgcagaaatctccaaaaagatcggcagtgagtggatacttgtctgtgtgacattgggagtgccgtcat
acgttattgatcaaatcaaaattgacggcacttccgatgtaccggcaaagatattcgaaggactgcgtcgatggagggaa
cttcgaagagaaagatcagatgatgaacttatcgtagaattgaaggaagccctgggggagcatggcagacaagacctggt
ggaggtggtagaaaatcacattaaaaaatgtatgttggagaaggaaaagaatataaacacagctttacattccatggaga
aaatagtcactgagaaattcctcgcagaaatctcaaaaaagatcggcagtgagtggatacttgtctgtgtcacattggga
gtgccgtcatacgttattgatcaaattaaaattgacggcacttccaatgtaccagcaaagattttcgaaggactgcgtcg
atggcgggaacttcgaagagaaagatcagaagatgaacttatagtagaattgaaggacgccctggaggagcatggcagac
aagacctggtggaggtggtagaaaatcacattaaaaaatgtatgttggagaaggaaaagaatataaacacagctttacat
tccatggagaccgaagatactgaggtgaaagacttccgggagaagctacatacgttgaattatttagaaacccaaaaggt
tcctgtatctccgcttcagcgaacaagaaagatgccgttggaaaatattttcgctcctatttcaatcagagaggacctcg
aatatcaagggaaaggccgaaatattggaatgaaaaataaacgaactaaacctgtaaactctcccgacgacatattttac
atcgacggcgatgttgctagaaatgtctttatgttaggggatgctggggagaaatatctttaa

Protein
Protein IDpfu_aug2.0_4740.1_02656.t1
Definition-
>pfu_aug2.0_4740.1_02656.t1
MGNQTSKRTKPPTLKQVDKNRCKVIVTEKFLAEISKKIGSEWILVCVTLGVPSYVIDQIKIDGTSDVPAKIFEGLRRWRE
LRRERSDDELIVELKEALGEHGRQDLVEVVENHIKKCMLEKEKNINTALHSMEKIVTEKFLAEISKKIGSEWILVCVTLG
VPSYVIDQIKIDGTSNVPAKIFEGLRRWRELRRERSEDELIVELKDALEEHGRQDLVEVVENHIKKCMLEKEKNINTALH
SMETEDTEVKDFREKLHTLNYLETQKVPVSPLQRTRKMPLENIFAPISIREDLEYQGKGRNIGMKNKRTKPVNSPDDIFY
IDGDVARNVFMLGDAGEKYL

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