Gene
| Gene Model ID | pfu_aug2.0_4665.1_19343 |
|---|---|
| Locus | scaffold4665.1 : 2223 ... 35969 : - |
| To GenomeBrowser | scaffold4665.1:2223..35969 |
| Genes list of scaffold | scaffold4665.1 |
| Synonym | pfu_aug1.0_3902.1_44821 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4665.1_19343.t1 | 3 | 1 | Transglut_N | 131 | 252 | 1.3e-24 | 86.5 | 1.0e-26 | 1.7e-23 | 82.9 |
| pfu_aug2.0_4665.1_19343.t1 | 3 | 1 | Transglut_C | 165 | 210 | 1.5e-10 | 41.0 | 2.2 | 3700.0 | -2.0 |
| pfu_aug2.0_4665.1_19343.t1 | 1 | 1 | Transglut_core | 382 | 528 | 2.2e-14 | 53.6 | 4.0e-17 | 6.6e-14 | 52.0 |
| pfu_aug2.0_4665.1_19343.t1 | 3 | 2 | Transglut_C | 602 | 639 | 1.5e-10 | 41.0 | 5.0e-05 | 0.083 | 12.9 |
| pfu_aug2.0_4665.1_19343.t1 | 3 | 2 | Transglut_N | 607 | 640 | 1.3e-24 | 86.5 | 0.63 | 1000.0 | -0.3 |
| pfu_aug2.0_4665.1_19343.t1 | 3 | 3 | Transglut_C | 720 | 813 | 1.5e-10 | 41.0 | 1.1e-08 | 1.8e-05 | 24.7 |
| pfu_aug2.0_4665.1_19343.t1 | 3 | 3 | Transglut_N | 732 | 754 | 1.3e-24 | 86.5 | 3.2 | 5300.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4665.1_19343.t1 | gi|742234303|ref|XP_010829654.1| | PREDICTED: protein-glutamine gamma-glutamyltransferase K [Bison bison bison] | 0.0 |
| pfu_aug2.0_4665.1_19343.t1 | gi|594075499|ref|XP_006061522.1| | PREDICTED: protein-glutamine gamma-glutamyltransferase K [Bubalus bubalis] | 0.0 |
| pfu_aug2.0_4665.1_19343.t1 | gi|555997249|ref|XP_005910351.1| | PREDICTED: protein-glutamine gamma-glutamyltransferase K [Bos mutus] | 0.0 |
| pfu_aug2.0_4665.1_19343.t1 | gi|58330890|ref|NP_001010991.1| | protein-glutamine gamma-glutamyltransferase K [Bos taurus] | 0.0 |
| pfu_aug2.0_4665.1_19343.t1 | gi|296483599|tpg|DAA25714.1| | TPA: protein-glutamine gamma-glutamyltransferase K [Bos taurus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4665.1_19343.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4665.1_19343.t1 atgccgcggtacggacggagaagacgatacaccggaacatcaagctatctgaggagtaggaggaatagacgatattcctc atatgggtcatacagctcatatggatcatatagctcatatagctcatatggatcattccgttattcctcaagacccacaa agaagtcaggacttctcatatccaaggcaagagaggaagccgaaaggataagaaagcagatagagagagtggaaagaaaa cgaaggttaaggagggagagggaagagaaagaaaagaaggaggaggaagaaagattacgcaaagaagaagaggagagaga aaaaagggagaaggaagcacgagaaaagaccgaaagagaaagggctgaacgggataagaaacgtccagtaaaggtagttg atgttgatcttcacatccaagagaatgcaaaggaacatcacactgataagtatgacttgacacagaaagagaaaaacgct gaaccagtcatcagacgaggacagcccttcctgatggacgttacatttgatcgaccatataaaaatgagcaacatgactt gaggatagtcctcagaatagaggctggcaatggtgttcaatcgtttatgagacttaaagaaaacggagaaaaacccagcg gaactgacaagtgtcatgcacggcttatcaaaaacgagaaaaataccatctatatggaagtgcagctgcctcatgattgt atcgttggagaatggtcactgagcatcgataccagggttcaggggagtggtgataggtatgatcgatacgatcatcctgt ggacatcaatgttataatgaatccatggtgtaaagatgatacggtgtttatgcctgaaaaagacagagacggagcaggtt taaatgaatacgttttaaatgataggggagctgtattcagaggaagctatgcatccccttggtttttagctcagtttgaa gatggcatattggaagtttgtttccagttattgagggatgggaataaatcgaaatataacaaggccctaggagatccagt gaaaattgcacgacaactgacgtatttgcaaggctatcttgtatggaccgtgcagcggagcacaactacaggattcatcg aacttcacacaaacggagttcaacaaacaacaggggacaacaacaaatacaagaacactcattcaatcaacaataaggtt cttgaaggaaattggtcaggtaattatgaaggaggagaaaaaccaacacactggaacggaagtgacgccatattagaaag atatgccgagacggggaagattgtgaaatttggacaatgttgggttttctcggcagtcactgttacggtttgcagggcac ttggaataccatgtaagagtgtgacttgtatcggatctgcacatgatacggacgattccacctgcattgatgagtactat gctgaaaatgaggagggagatatggagaagtcaaaatattacacaagtgactctatttggaattttcacgtatggaatga gatcttcgtcaaacggtcggaccttcatgatcgcacctttgatggatggcaagtgatagacgcaactccacaggaagaaa ctagtgaaaatctatttaagggtgcgtatgcctgtggaccagcgtcggtaatggcaatcaaaaaaggaacgcccgaaaac aaacaagctgtaataaatgctggacttgcttcaaatatatacagaaccagaggatatacggagcaagacgaaaatgaaaa gaaggaccttgagattacaatgagggatatcaatcaagatggagggaaggtgctgatgggacaagacttcaatatattct tagatttggaaaacaaaagccatcgtgctatcaaagcaaatgtatcggtttctttgtctatacaaacctatacaggtgac aatttagcaacgtatcttcgggaagagtttaaaggaataatgatcagtggaaatacagtgaaaccgttaaaggtgaacgt gaaagcagacaaatacataaaacacttaaccagggacggacaaggagacaatgatcttgacggggacatggaggctgtag tcgtcgctaattttgatgacaattttggtgaccatgatttcgttcatttagtggaacagtttagagttggatgggctgat ctaaaaattaaggcgccagaaaaagttgctatgggtaccccgttcgacgtcacgctatcattcacagaggatgttccaat gacattgaccaaatgtaaattgaactgggagggcgctggatttacaaaagtggagaactacgatataccgaacattactg atgcgaaaaattggtcacataagatcactgtgaagcccaagaagagaaatcccgatggagaattgattgtgtcattggat tgcaaggaacttccggatatcacagggacacttgatattgccgtgtactaa |
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Protein
| Protein ID | pfu_aug2.0_4665.1_19343.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4665.1_19343.t1 MPRYGRRRRYTGTSSYLRSRRNRRYSSYGSYSSYGSYSSYSSYGSFRYSSRPTKKSGLLISKAREEAERIRKQIERVERK RRLRREREEKEKKEEEERLRKEEEEREKREKEAREKTERERAERDKKRPVKVVDVDLHIQENAKEHHTDKYDLTQKEKNA EPVIRRGQPFLMDVTFDRPYKNEQHDLRIVLRIEAGNGVQSFMRLKENGEKPSGTDKCHARLIKNEKNTIYMEVQLPHDC IVGEWSLSIDTRVQGSGDRYDRYDHPVDINVIMNPWCKDDTVFMPEKDRDGAGLNEYVLNDRGAVFRGSYASPWFLAQFE DGILEVCFQLLRDGNKSKYNKALGDPVKIARQLTYLQGYLVWTVQRSTTTGFIELHTNGVQQTTGDNNKYKNTHSINNKV LEGNWSGNYEGGEKPTHWNGSDAILERYAETGKIVKFGQCWVFSAVTVTVCRALGIPCKSVTCIGSAHDTDDSTCIDEYY AENEEGDMEKSKYYTSDSIWNFHVWNEIFVKRSDLHDRTFDGWQVIDATPQEETSENLFKGAYACGPASVMAIKKGTPEN KQAVINAGLASNIYRTRGYTEQDENEKKDLEITMRDINQDGGKVLMGQDFNIFLDLENKSHRAIKANVSVSLSIQTYTGD NLATYLREEFKGIMISGNTVKPLKVNVKADKYIKHLTRDGQGDNDLDGDMEAVVVANFDDNFGDHDFVHLVEQFRVGWAD LKIKAPEKVAMGTPFDVTLSFTEDVPMTLTKCKLNWEGAGFTKVENYDIPNITDAKNWSHKITVKPKKRNPDGELIVSLD CKELPDITGTLDIAVY |
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