Gene
| Gene Model ID | pfu_aug2.0_459.1_30794 |
|---|---|
| Locus | scaffold459.1 : 229226 ... 237679 : + |
| To GenomeBrowser | scaffold459.1:229226..237679 |
| Genes list of scaffold | scaffold459.1 |
| Synonym | pfu_aug1.0_26082.1_62406 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_459.1_30794.t1 | 9 | 1 | TSP_1 | 34 | 56 | 0.0 | 242.6 | 0.12 | 1800.0 | -0.9 |
| pfu_aug2.0_459.1_30794.t1 | 9 | 2 | TSP_1 | 102 | 142 | 0.0 | 242.6 | 3.8e-13 | 5.6e-09 | 35.9 |
| pfu_aug2.0_459.1_30794.t1 | 9 | 3 | TSP_1 | 154 | 203 | 0.0 | 242.6 | 4.9e-15 | 7.2e-11 | 42.0 |
| pfu_aug2.0_459.1_30794.t1 | 9 | 4 | TSP_1 | 208 | 248 | 0.0 | 242.6 | 3.8e-13 | 5.6e-09 | 35.9 |
| pfu_aug2.0_459.1_30794.t1 | 9 | 5 | TSP_1 | 260 | 309 | 0.0 | 242.6 | 4.9e-15 | 7.2e-11 | 42.0 |
| pfu_aug2.0_459.1_30794.t1 | 9 | 6 | TSP_1 | 316 | 366 | 0.0 | 242.6 | 2.2e-15 | 3.2e-11 | 43.1 |
| pfu_aug2.0_459.1_30794.t1 | 9 | 7 | TSP_1 | 373 | 424 | 0.0 | 242.6 | 2.6e-17 | 3.8e-13 | 49.3 |
| pfu_aug2.0_459.1_30794.t1 | 9 | 8 | TSP_1 | 432 | 483 | 0.0 | 242.6 | 4.1e-08 | 0.00061 | 19.8 |
| pfu_aug2.0_459.1_30794.t1 | 9 | 9 | TSP_1 | 491 | 543 | 0.0 | 242.6 | 1.4e-09 | 2.1e-05 | 24.5 |
Transcript
| Transcript ID | pfu_aug2.0_459.1_30794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_459.1_30794.t1 atgaaaggacaggacttattttggacatttatcatcgtagttgttttggatctattagtagtacaaggtgattttacgtg cttccgtaaattcagaacaaaaagaggaaaggaattctgtaaaggtcccgtgaggaaaaagaataaatatccaaatgcag agaaatgctgtgccaagcgtgggaagggatttgccatggaaatagaaacagttggcaagaatcggtacagatgtactccg tgcagtgccttgttgacacccagacctaccatcatatctatacgtacaacgtcagagcgtcctgactggggtaactggag tccatgtagcaccacatgtggcgccggctggagatcacgttatagaatgtgtgatgactgcgacaaaaatcactttgaaa atgtccaatcagaaccctgtatgcagaacttctactgtccagtggacggtaactggggcccgtggtttgcttggactcct tgttcagattcctgtggaggagggacaaggaaaagggagagacgttgtaattatcctccacctacacatgggggtcggga ctgtccaggggacagagagaaagaagaatcttgtaacgaagaaccatgtgcagagcgtcctgactggggtaactggagtc catgtagcactacatgtggcgccggctggagatcacgttatagaatgtgtgatgactgcgacaaaaatcactttgaaaat gtccaatcagaaccctgtatgcagaacttctactgtccagtggacggtaactggggcccgtggtttgcttggactccttg ttcagattcctgtggaggagggacaaggaaaagggagagacgttgtaattatcctccacctacacatgggggtcgggact gtccaggggacagagagaaagaagaatcttgtaacgaagaaccatgtgcagttgacggtaactggggaccatggacgcgt tattcccagtgtagtgccacatgtggtacgggaaccatggtgcggacaagagactgtgacgaccccgcccctcagtacgg gggaaagaattgcaggggacagtctatatacacaagacggtgtaaaagtagggagtgtccactacatggaggatggtccc tctggggctcatggagtgagtgctcagtcacgtgtgacacgggcgtggtgaccagacgacgaacgtgcgacagcccgaga ccactgtttggagggcgtgactgcgaggggtcggatacggacacccgtggctgctttaccaataaaaagtgccccgtcca tggtggatggacaaaatggtcggactatggtcgatgtaatgccaatcgttgtgagaaaggatttcagatgcgatcaagga gctgtactaacccgaggccaaggcaccgaggcaggccatgccgaggcagatcatacgaaaggtctgaatgcatcaatgac gataactgccctacggagggaaattggtgtaactggaacgaatggtcgcaatgtacggcaacctgtacaggcctaaactc tatgcaagtacggcagcgatcttgtttgtgccccgctcccaacgccggagggacaacatgtgatggtgaaagttttgaag ttcgggaatgtaaagacgttcaaccatgtaatccttacagtgaggttatttctgagagaaaaggcatgtccaaattgtat agtgaacagatagaggggtcaggtgacggcagtaagtcagatgtcgaccaggaagaagataaagacgcaggtccagagag tacgtcggtatcaccagagaccattttacagtag |
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Protein
| Protein ID | pfu_aug2.0_459.1_30794.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_459.1_30794.t1 MKGQDLFWTFIIVVVLDLLVVQGDFTCFRKFRTKRGKEFCKGPVRKKNKYPNAEKCCAKRGKGFAMEIETVGKNRYRCTP CSALLTPRPTIISIRTTSERPDWGNWSPCSTTCGAGWRSRYRMCDDCDKNHFENVQSEPCMQNFYCPVDGNWGPWFAWTP CSDSCGGGTRKRERRCNYPPPTHGGRDCPGDREKEESCNEEPCAERPDWGNWSPCSTTCGAGWRSRYRMCDDCDKNHFEN VQSEPCMQNFYCPVDGNWGPWFAWTPCSDSCGGGTRKRERRCNYPPPTHGGRDCPGDREKEESCNEEPCAVDGNWGPWTR YSQCSATCGTGTMVRTRDCDDPAPQYGGKNCRGQSIYTRRCKSRECPLHGGWSLWGSWSECSVTCDTGVVTRRRTCDSPR PLFGGRDCEGSDTDTRGCFTNKKCPVHGGWTKWSDYGRCNANRCEKGFQMRSRSCTNPRPRHRGRPCRGRSYERSECIND DNCPTEGNWCNWNEWSQCTATCTGLNSMQVRQRSCLCPAPNAGGTTCDGESFEVRECKDVQPCNPYSEVISERKGMSKLY SEQIEGSGDGSKSDVDQEEDKDAGPESTSVSPETILQ |
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