Gene
| Gene Model ID | pfu_aug2.0_459.1_30784 |
|---|---|
| Locus | scaffold459.1 : 27005 ... 42465 : - |
| To GenomeBrowser | scaffold459.1:27005..42465 |
| Genes list of scaffold | scaffold459.1 |
| Synonym | pfu_aug1.0_1637.1_58608 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_459.1_30784.t3 | 2 | 1 | UDG | 71 | 104 | 1.5e-20 | 73.1 | 4.4e-06 | 0.066 | 12.6 |
| pfu_aug2.0_459.1_30784.t3 | 2 | 2 | UDG | 108 | 239 | 1.5e-20 | 73.1 | 4.4e-20 | 6.6e-16 | 58.1 |
Transcript
| Transcript ID | pfu_aug2.0_459.1_30784.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_459.1_30784.t1 atgccccatcccccgggaatgatgatgtctgataatgtccacatcaagccagatccagatgctgaacctcccaagactcc caagaaaagagggccaaaaaagaaaagagtgaagcaggaggagataactgatcacatggcagtgaagaaacgtaaacggg atagatttaatggcatgacggaggatgaagttatgcaaaaaggacttcctgaccacctacaagaaaatctggatattgtc attgttggtattaacccaggactctgtgcagcctatgttggtcatcactatgcaggacctggaaatcatttctggaaatg catgtttttgtctggattgataccagagccttttaatgcatatgatgactacaaactgactaagtatggtataggtttta caaatatagttgccagaacaacaagaggcagttcagatctcacaagaaaagaaatcaaagaaggttcaacgcttttgatt gagaaaatcaagcagtataagccaaaaattgcagtttttaatggaaagggtatttatgaagtattcgtcggccacaagaa ttttgccattggtaaacaaccagacaagcttgaaggaactgatacagttgtatttgtgatgccttcatcaagtgctagat gttctcagctccccagagcagtggacaaggtacctttctacgctgctctgaagaaactaagagaccatctcaaaggtgat cttgaaactttagatgacgcagaagtttgttttcctgatctcgaactcaaagttgtgaaaaaagaaccaaaaccagaggc agcagatgaagaatcgtgtgcgaatgtttcaaaatattttatgcctaatggacaaatgaacaatacgtctgtggcagatg gtgaacaatacagagtaaatcattgtaataatttcatgacggttaaacaggagaatacgtatggctttaatgactatggt gggaatgcatataactgtgattctcgacccatgtcgtacaatatgaaccagggtaaggaaacggtacctcagggtagctc tatgtatgataattctagtcaggttgtaccaagtgtgagcagcgcccattgttaccaagatggtaacaattttcattctc agggaccatatcctcataatgacttccaaatgcaaccatgcatgacacagcagatgtcatgcaacaccggtcagccctct cagcagcagatgatgatgaatcaacattccagctatatgaatggaccaaatcaagattaccaaaggcattatcaaactca gcttcagagttatcaatatcaacaatacggtcagaactcagccacacctgttcagactaattatatgtcacaaagtttca cacaagcaccgggtttcacacaagctatgtctatgcaaatgcattcacagtttcagcaacaaaatgagagatctttttcg atgcaatctcaggctgcatttagaatgtctatgtctactcataatgcaatgggttggcaggggcaacaagggatggtaaa gcaggaatcgtatgattggtccaatggttgtaatggtggaatgaacccatgtggtgggccatcaccaaataatctccatt acgatggtgcttcacagggtcaaggtcaaggcagtaatgcacagcagtcattttctcagggtacaagtccgttgcaacac ctccaaaatctcagtcaggggttaaatatggaccttgtacctcagaggccaaattctcagcagtcctcttacagtagctc gcctagacaatgtctgacaccagggaccaatgccagcccaatgggaagcccactgaacatgaacagtccgtctactcata acaatagacccacgctagaaatgactagtgttaaacaagaacctagtgattattcctctcctatgtcgtgtccatatcaa gaattatattaa |
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| Transcript ID | pfu_aug2.0_459.1_30784.t2 |
| Definition | - |
>pfu_aug2.0_459.1_30784.t2 atgccccatcccccgggaatgatgatgtctgataatgtccacatcaagccagatccagatgctgaacctcccaagactcc caagaaaagagggccaaaaaagaaaagagtgaagcaggaggagataactgatcacatggcagtgaagaaacgtaaacggg atagatttaatggcatgacggaggatgaagttatgcaaaaaggacttcctgaccacctacaagaaaatctggatattgtc attgttggtattaacccaggactctgtgcagcctatgttggtcatcactatgcaggacctggaaatcatttctgtaaagg agttggtattaacccaggactctgtgcagcctatgttggtcatcactatgcaggacctggaaatcatttctggaaatgca tgtttttgtctggattgataccagagccttttaatgcatatgatgactacaaactgactaagtatggtataggttttaca aatatagttgccagaacaacaagaggcagttcagatctcacaagaaaagaaatcaaagaaggttcaacgcttttgattga gaaaatcaagcagtataagccaaaaattgcagtttttaatggaaagggtatttatgaagtattcgtcggccacaagaatt ttgccattggtaaacaaccagacaagcttgaaggaactgatacagttgtatttgtgatgccttcatcaagtgctagatgt tctcagctccccagagcagtggacaaggtacctttctacgctgctctgaagaaactaagagaccatctcaaaggtgatct tgaaactttagatgacgcagaagtttgttttcctgatctcgaactcaaagttgtgaaaaaagaaccaaaaccagaggcag cagatgaagaatcgtgtgcgaatgtttcaaaatattttatgcctaatggacaaatgaacaatacgtctgtggcagatggt gaacaatacagagtaaatcattgtaataatttcatgacggttaaacaggagaatacgtatggctttaatgactatggtgg gaatgcatataactgtgattctcgacccatgtcgtacaatatgaaccagggtaaggaaacggtacctcagggtagctcta tgtatgataattctagtcaggttgtaccaagtgtgagcagcgcccattgttaccaagatggtaacaattttcattctcag ggaccatatcctcataatgacttccaaatgcaaccatgcatgacacagcagatgtcatgcaacaccggtcagccctctca gcagcagatgatgatgaatcaacattccagctatatgaatggaccaaatcaagattaccaaaggcattatcaaactcagc ttcagagttatcaatatcaacaatacggtcagaactcagccacacctgttcagactaattatatgtcacaaagtttcaca caagcaccgggtttcacacaagctatgtctatgcaaatgcattcacagtttcagcaacaaaatgagagatctttttcgat gcaatctcaggctgcatttagaatgtctatgtctactcataatgcaatgggttggcaggggcaacaagggatggtaaagc aggaatcgtatgattggtccaatggttgtaatggtggaatgaacccatgtggtgggccatcaccaaataatctccattac gatggtgcttcacagggtcaaggtcaaggcagtaatgcacagcagtcattttctcagggtacaagtccgttgcaacacct ccaaaatctcagtcaggggttaaatatggaccttgtacctcagaggccaaattctcagcagtcctcttacagtagctcgc ctagacaatgtctgacaccagggaccaatgccagcccaatgggaagcccactgaacatgaacagtccgtctactcataac aatagacccacgctagaaatgactagtgttaaacaagaacctagtgattattcctctcctatgtcgtgtccatatcaagg taatatgggaacctga |
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| Transcript ID | pfu_aug2.0_459.1_30784.t3 |
| Definition | - |
>pfu_aug2.0_459.1_30784.t3 atgccccatcccccgggaatgatgatgtctgataatgtccacatcaagccagatccagatgctgaacctcccaagactcc caagaaaagagggccaaaaaagaaaagagtgaagcaggaggagataactgatcacatggcagtgaagaaacgtaaacggg atagatttaatggcatgacggaggatgaagttatgcaaaaaggacttcctgaccacctacaagaaaatctggatattgtc attgttggtattaacccaggactctgtgcagcctatgttggtcatcactatgcaggacctggaaatcatttctgtaaagg agttggtattaacccaggactctgtgcagcctatgttggtcatcactatgcaggacctggaaatcatttctggaaatgca tgtttttgtctggattgataccagagccttttaatgcatatgatgactacaaactgactaagtatggtataggttttaca aatatagttgccagaacaacaagaggcagttcagatctcacaagaaaagaaatcaaagaaggttcaacgcttttgattga gaaaatcaagcagtataagccaaaaattgcagtttttaatggaaagggtatttatgaagtattcgtcggccacaagaatt ttgccattggtaaacaaccagacaagcttgaaggaactgatacagttgtatttgtgatgccttcatcaagtgctagatgt tctcagctccccagagcagtggacaaggtacctttctacgctgctctgaagaaactaagagaccatctcaaaggtgatct tgaaactttagatgacgcagaagtttgttttcctgatctcgaactcaaagttgtgaaaaaagaaccaaaaccagaggcag cagatgaagaatcgtgtgcgaatgtttcaaaatattttatgcctaatggacaaatgaacaatacgtctgtggcagatggt gaacaatacagagtaaatcattgtaataatttcatgacggttaaacaggagaatacgtatggctttaatgactatggtgg gaatgcatataactgtgattctcgacccatgtcgtacaatatgaaccagggtaaggaaacggtacctcagggtagctcta tgtatgataattctagtcaggttgtaccaagtgtgagcagcgcccattgttaccaagatggtaacaattttcattctcag ggaccatatcctcataatgacttccaaatgcaaccatgcatgacacagcagatgtcatgcaacaccggtcagccctctca gcagcagatgatgatgaatcaacattccagctatatgaatggaccaaatcaagattaccaaaggcattatcaaactcagc ttcagagttatcaatatcaacaatacggtcagaactcagccacacctgttcagactaattatatgtcacaaagtttcaca caagcaccgggtttcacacaagctatgtctatgcaaatgcattcacagtttcagcaacaaaatgagagatctttttcgat gcaatctcaggctgcatttagaatgtctatgtctactcataatgcaatgggttggcaggggcaacaagggatggtaaagc aggaatcgtatgattggtccaatggttgtaatggtggaatgaacccatgtggtgggccatcaccaaataatctccattac gatggtgcttcacagggtcaaggtcaaggcagtaatgcacagcagtcattttctcagggtacaagtccgttgcaacacct ccaaaatctcagtcaggggttaaatatggaccttgtacctcagaggccaaattctcagcagtcctcttacagtagctcgc ctagacaatgtctgacaccagggaccaatgccagcccaatgggaagcccactgaacatgaacagtccgtctactcataac aatagacccacgctagaaatgactagtgttaaacaagaacctagtgattattcctctcctatgtcgtgtccatatcaaga attatattaa |
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Protein
| Protein ID | pfu_aug2.0_459.1_30784.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_459.1_30784.t1 MPHPPGMMMSDNVHIKPDPDAEPPKTPKKRGPKKKRVKQEEITDHMAVKKRKRDRFNGMTEDEVMQKGLPDHLQENLDIV IVGINPGLCAAYVGHHYAGPGNHFWKCMFLSGLIPEPFNAYDDYKLTKYGIGFTNIVARTTRGSSDLTRKEIKEGSTLLI EKIKQYKPKIAVFNGKGIYEVFVGHKNFAIGKQPDKLEGTDTVVFVMPSSSARCSQLPRAVDKVPFYAALKKLRDHLKGD LETLDDAEVCFPDLELKVVKKEPKPEAADEESCANVSKYFMPNGQMNNTSVADGEQYRVNHCNNFMTVKQENTYGFNDYG GNAYNCDSRPMSYNMNQGKETVPQGSSMYDNSSQVVPSVSSAHCYQDGNNFHSQGPYPHNDFQMQPCMTQQMSCNTGQPS QQQMMMNQHSSYMNGPNQDYQRHYQTQLQSYQYQQYGQNSATPVQTNYMSQSFTQAPGFTQAMSMQMHSQFQQQNERSFS MQSQAAFRMSMSTHNAMGWQGQQGMVKQESYDWSNGCNGGMNPCGGPSPNNLHYDGASQGQGQGSNAQQSFSQGTSPLQH LQNLSQGLNMDLVPQRPNSQQSSYSSSPRQCLTPGTNASPMGSPLNMNSPSTHNNRPTLEMTSVKQEPSDYSSPMSCPYQ ELY |
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| Protein ID | pfu_aug2.0_459.1_30784.t2 |
| Definition | - |
>pfu_aug2.0_459.1_30784.t2 MPHPPGMMMSDNVHIKPDPDAEPPKTPKKRGPKKKRVKQEEITDHMAVKKRKRDRFNGMTEDEVMQKGLPDHLQENLDIV IVGINPGLCAAYVGHHYAGPGNHFCKGVGINPGLCAAYVGHHYAGPGNHFWKCMFLSGLIPEPFNAYDDYKLTKYGIGFT NIVARTTRGSSDLTRKEIKEGSTLLIEKIKQYKPKIAVFNGKGIYEVFVGHKNFAIGKQPDKLEGTDTVVFVMPSSSARC SQLPRAVDKVPFYAALKKLRDHLKGDLETLDDAEVCFPDLELKVVKKEPKPEAADEESCANVSKYFMPNGQMNNTSVADG EQYRVNHCNNFMTVKQENTYGFNDYGGNAYNCDSRPMSYNMNQGKETVPQGSSMYDNSSQVVPSVSSAHCYQDGNNFHSQ GPYPHNDFQMQPCMTQQMSCNTGQPSQQQMMMNQHSSYMNGPNQDYQRHYQTQLQSYQYQQYGQNSATPVQTNYMSQSFT QAPGFTQAMSMQMHSQFQQQNERSFSMQSQAAFRMSMSTHNAMGWQGQQGMVKQESYDWSNGCNGGMNPCGGPSPNNLHY DGASQGQGQGSNAQQSFSQGTSPLQHLQNLSQGLNMDLVPQRPNSQQSSYSSSPRQCLTPGTNASPMGSPLNMNSPSTHN NRPTLEMTSVKQEPSDYSSPMSCPYQGNMGT |
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| Protein ID | pfu_aug2.0_459.1_30784.t3 |
| Definition | - |
>pfu_aug2.0_459.1_30784.t3 MPHPPGMMMSDNVHIKPDPDAEPPKTPKKRGPKKKRVKQEEITDHMAVKKRKRDRFNGMTEDEVMQKGLPDHLQENLDIV IVGINPGLCAAYVGHHYAGPGNHFCKGVGINPGLCAAYVGHHYAGPGNHFWKCMFLSGLIPEPFNAYDDYKLTKYGIGFT NIVARTTRGSSDLTRKEIKEGSTLLIEKIKQYKPKIAVFNGKGIYEVFVGHKNFAIGKQPDKLEGTDTVVFVMPSSSARC SQLPRAVDKVPFYAALKKLRDHLKGDLETLDDAEVCFPDLELKVVKKEPKPEAADEESCANVSKYFMPNGQMNNTSVADG EQYRVNHCNNFMTVKQENTYGFNDYGGNAYNCDSRPMSYNMNQGKETVPQGSSMYDNSSQVVPSVSSAHCYQDGNNFHSQ GPYPHNDFQMQPCMTQQMSCNTGQPSQQQMMMNQHSSYMNGPNQDYQRHYQTQLQSYQYQQYGQNSATPVQTNYMSQSFT QAPGFTQAMSMQMHSQFQQQNERSFSMQSQAAFRMSMSTHNAMGWQGQQGMVKQESYDWSNGCNGGMNPCGGPSPNNLHY DGASQGQGQGSNAQQSFSQGTSPLQHLQNLSQGLNMDLVPQRPNSQQSSYSSSPRQCLTPGTNASPMGSPLNMNSPSTHN NRPTLEMTSVKQEPSDYSSPMSCPYQELY |
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