Gene
| Gene Model ID | pfu_aug2.0_459.1_30783 |
|---|---|
| Locus | scaffold459.1 : 15069 ... 28685 : - |
| To GenomeBrowser | scaffold459.1:15069..28685 |
| Genes list of scaffold | scaffold459.1 |
| Synonym | pfu_aug1.0_12516.1_46513 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_459.1_30783.t1 | 10 | 1 | Ank_5 | 8 | 29 | 0.0 | 182.6 | 1.2 | 3000.0 | -1.4 |
| pfu_aug2.0_459.1_30783.t1 | 5 | 1 | Ank_2 | 9 | 101 | 0.0 | 285.4 | 2.7e-22 | 6.8e-19 | 68.0 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 1 | Ank_3 | 10 | 26 | 0.0 | 172.6 | 0.83 | 2100.0 | -0.5 |
| pfu_aug2.0_459.1_30783.t1 | 6 | 1 | Ank_4 | 18 | 25 | 0.0 | 187.5 | 1.7 | 4200.0 | -1.6 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 2 | Ank_5 | 33 | 78 | 0.0 | 182.6 | 2.4e-08 | 5.9e-05 | 23.1 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 2 | Ank_3 | 41 | 68 | 0.0 | 172.6 | 1.1e-08 | 2.7e-05 | 23.9 |
| pfu_aug2.0_459.1_30783.t1 | 9 | 1 | Ank | 41 | 71 | 0.0 | 218.0 | 3.4e-09 | 8.3e-06 | 25.3 |
| pfu_aug2.0_459.1_30783.t1 | 6 | 2 | Ank_4 | 42 | 94 | 0.0 | 187.5 | 5.1e-12 | 1.3e-08 | 35.1 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 3 | Ank_3 | 73 | 98 | 0.0 | 172.6 | 5.2e-07 | 0.0013 | 18.7 |
| pfu_aug2.0_459.1_30783.t1 | 9 | 2 | Ank | 73 | 98 | 0.0 | 218.0 | 9.4e-09 | 2.3e-05 | 23.9 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 3 | Ank_5 | 75 | 101 | 0.0 | 182.6 | 1.6e-06 | 0.004 | 17.3 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 4 | Ank_3 | 108 | 134 | 0.0 | 172.6 | 1.2e-07 | 0.00029 | 20.8 |
| pfu_aug2.0_459.1_30783.t1 | 9 | 3 | Ank | 108 | 138 | 0.0 | 218.0 | 1.9e-12 | 4.6e-09 | 35.6 |
| pfu_aug2.0_459.1_30783.t1 | 6 | 3 | Ank_4 | 108 | 160 | 0.0 | 187.5 | 4.1e-17 | 1.0e-13 | 51.3 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 4 | Ank_5 | 109 | 147 | 0.0 | 182.6 | 2.7e-13 | 6.8e-10 | 38.8 |
| pfu_aug2.0_459.1_30783.t1 | 5 | 2 | Ank_2 | 111 | 199 | 0.0 | 285.4 | 7.1e-24 | 1.8e-20 | 73.0 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 5 | Ank_3 | 139 | 162 | 0.0 | 172.6 | 1.2e-07 | 0.00031 | 20.7 |
| pfu_aug2.0_459.1_30783.t1 | 9 | 4 | Ank | 139 | 162 | 0.0 | 218.0 | 7.8e-08 | 0.00019 | 21.0 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 5 | Ank_5 | 142 | 177 | 0.0 | 182.6 | 3.8e-06 | 0.0094 | 16.1 |
| pfu_aug2.0_459.1_30783.t1 | 6 | 4 | Ank_4 | 151 | 194 | 0.0 | 187.5 | 6.6e-11 | 1.6e-07 | 31.6 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 6 | Ank_5 | 171 | 195 | 0.0 | 182.6 | 1.5e-07 | 0.00037 | 20.6 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 6 | Ank_3 | 173 | 198 | 0.0 | 172.6 | 1.5e-10 | 3.8e-07 | 29.7 |
| pfu_aug2.0_459.1_30783.t1 | 9 | 5 | Ank | 173 | 204 | 0.0 | 218.0 | 1.6e-11 | 3.8e-08 | 32.7 |
| pfu_aug2.0_459.1_30783.t1 | 5 | 3 | Ank_2 | 178 | 266 | 0.0 | 285.4 | 2.4e-19 | 5.8e-16 | 58.6 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 7 | Ank_5 | 193 | 249 | 0.0 | 182.6 | 1.1e-09 | 2.6e-06 | 27.4 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 7 | Ank_3 | 208 | 236 | 0.0 | 172.6 | 7.4e-05 | 0.18 | 12.1 |
| pfu_aug2.0_459.1_30783.t1 | 9 | 6 | Ank | 208 | 240 | 0.0 | 218.0 | 7.6e-06 | 0.019 | 14.7 |
| pfu_aug2.0_459.1_30783.t1 | 6 | 5 | Ank_4 | 209 | 262 | 0.0 | 187.5 | 5.7e-10 | 1.4e-06 | 28.6 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 8 | Ank_5 | 227 | 262 | 0.0 | 182.6 | 5.8e-06 | 0.014 | 15.6 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 8 | Ank_3 | 242 | 270 | 0.0 | 172.6 | 0.005 | 12.0 | 6.4 |
| pfu_aug2.0_459.1_30783.t1 | 9 | 7 | Ank | 242 | 267 | 0.0 | 218.0 | 0.0016 | 4.0 | 7.4 |
| pfu_aug2.0_459.1_30783.t1 | 5 | 4 | Ank_2 | 246 | 336 | 0.0 | 285.4 | 6.5e-23 | 1.6e-19 | 70.0 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 9 | Ank_5 | 262 | 315 | 0.0 | 182.6 | 8.2e-12 | 2.0e-08 | 34.1 |
| pfu_aug2.0_459.1_30783.t1 | 9 | 8 | Ank | 277 | 307 | 0.0 | 218.0 | 2.1e-08 | 5.1e-05 | 22.8 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 9 | Ank_3 | 279 | 303 | 0.0 | 172.6 | 0.0007 | 1.7 | 9.1 |
| pfu_aug2.0_459.1_30783.t1 | 5 | 5 | Ank_2 | 280 | 356 | 0.0 | 285.4 | 1.0e-17 | 2.6e-14 | 53.3 |
| pfu_aug2.0_459.1_30783.t1 | 6 | 6 | Ank_4 | 280 | 329 | 0.0 | 187.5 | 1.0e-14 | 2.5e-11 | 43.7 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 10 | Ank_5 | 300 | 337 | 0.0 | 182.6 | 1.4e-10 | 3.4e-07 | 30.3 |
| pfu_aug2.0_459.1_30783.t1 | 10 | 10 | Ank_3 | 309 | 333 | 0.0 | 172.6 | 7.2e-07 | 0.0018 | 18.3 |
| pfu_aug2.0_459.1_30783.t1 | 9 | 9 | Ank | 309 | 337 | 0.0 | 218.0 | 4.6e-10 | 1.1e-06 | 28.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_459.1_30783.t1 | gi|734615274|ref|XP_010735221.1| | PREDICTED: ankyrin repeat domain-containing protein 16 [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_459.1_30783.t1 | gi|658920012|ref|XP_008399745.1| | PREDICTED: ankyrin repeat domain-containing protein 16 [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_459.1_30783.t1 | gi|551513401|ref|XP_005808213.1| | PREDICTED: ankyrin repeat domain-containing protein 16-like [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_459.1_30783.t1 | gi|499049547|ref|XP_004575308.1| | PREDICTED: ankyrin repeat domain-containing protein 16 [Maylandia zebra] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_459.1_30783.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_459.1_30783.t1 atggctggagaccataacttctacaaagctgcacaaactggtgacttaacttttttcaaagcatgcagcaaaaaacatgg atctgatacatcatggctacacaaatactacgctaagtctggtgacacagtattacactactccgcacagtttggacatg tggagctcctgggctatttgatagagcagggagcggatgtagaaaaaccaaactttgacggaaagaaacctttacatgat gctgctcagaatggacattcagcatgtgtcaagtttctgcttgagaaaggagcaatgattgatggcctgaaaagagccga ttggacacctttgatgctagcctgtacaaagcatgacttggatgtcattagaatattagtggaacatggggcaaatctaa accttgtcaacaaagatggatggaatcctttccacattgcttgcagggagggtgatattcaggtgatgaagtacttactg agtaaagatacacagagctgggacactgtcagtaaaaatggaagaactcctctccacacagctgctctccatggtaacac tgaagcagtatcctatctccttgacaactgtgctgttgtcatggataccacagatagctgtgggagtacaccatttatag acgctctaagatcaggtcatgtggatattgcaagaattcttttgaacagacaaaaggtagacatccataaagaggataat tttggttaccaggccatacacttggctgtgcagacaggacagctgatgtctgtacagtttctggtggaggactgtagctt ggatgtcaacggaagatctactaaagatttcttcccattggctgtagcagctaaggaaggacagctatcggtgatgcagt acttggtaggtaaaggtgctgatattgatatggcagataacaaaggaaggactgccttgcatatagcagcagcagctcag catgccgagtgttgtcaatatctcctacagaggaatgccaagtgttcagccgatgtcaacggcaagacgcctcaggacta tgcacggaaacaacatgtgatagacgtttttactacattctgtgctggtaacgagactgctaatacacagagtgaagtca cataa |
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Protein
| Protein ID | pfu_aug2.0_459.1_30783.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_459.1_30783.t1 MAGDHNFYKAAQTGDLTFFKACSKKHGSDTSWLHKYYAKSGDTVLHYSAQFGHVELLGYLIEQGADVEKPNFDGKKPLHD AAQNGHSACVKFLLEKGAMIDGLKRADWTPLMLACTKHDLDVIRILVEHGANLNLVNKDGWNPFHIACREGDIQVMKYLL SKDTQSWDTVSKNGRTPLHTAALHGNTEAVSYLLDNCAVVMDTTDSCGSTPFIDALRSGHVDIARILLNRQKVDIHKEDN FGYQAIHLAVQTGQLMSVQFLVEDCSLDVNGRSTKDFFPLAVAAKEGQLSVMQYLVGKGADIDMADNKGRTALHIAAAAQ HAECCQYLLQRNAKCSADVNGKTPQDYARKQHVIDVFTTFCAGNETANTQSEVT |
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