Gene
| Gene Model ID | pfu_aug2.0_4576.1_22577 |
|---|---|
| Locus | scaffold4576.1 : 9414 ... 14404 : + |
| To GenomeBrowser | scaffold4576.1:9414..14404 |
| Genes list of scaffold | scaffold4576.1 |
| Synonym | pfu_aug1.0_4.1_57861 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4576.1_22577.t1 | 2 | 1 | DNA_pol_B_2 | 731 | 952 | 4.1e-36 | 124.6 | 2.4e-25 | 3.6e-21 | 75.3 |
| pfu_aug2.0_4576.1_22577.t1 | 2 | 2 | DNA_pol_B_2 | 1148 | 1390 | 4.1e-36 | 124.6 | 1.2e-17 | 1.8e-13 | 49.9 |
Transcript
| Transcript ID | pfu_aug2.0_4576.1_22577.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4576.1_22577.t1 atggaccccgcgcgtcttttattcaaagaaatagaagaagcagaatggggtgctacgtcaactctgaacattgctgacaa tatacttgatgatatccagaatgtaagagtcgtagaacatgtattatatgacgatatagagacaatggaatgggaacaac cctatgacaatgttgccgacactattttggatcaagcgtccaacagcgggtctgctttgcaatctctgagtgatttttat gatatactagaatcgtcctttcacgattacgattcactcggaaaagacgtggacatcatacccatttttgacatatcgga gtatggcaacgtctccctccaagatggtggtgcgctgctgaatggtgtccaagcagaaacccttgtcggtggtggcaaga agaattacgaaataaagctgatgaaagaaaaggaattaaaaaagatgggtgtcaaagacatcaattacgaactaaatttc aaaccgaatatgttccaacaagatagaaaattaagagatgtcttaggtatcttaaaagatgcttttggaaatatgattca aagggtgaaaaaagatctacagccagatgacatcatgagagccgccattcacaacgatgctctcgacacacccatcttta tacccttgaagccgatgcaggaattttcacccgaaatgatgatggatgttatcgtcaacgtcttgaatagccaagaggat atccctttcgattcctcaactcgagttgacatcggggccatcaagtatcctcgtggcggtcatagacataaaatcagcaa catacaacgatcgctgaagaacaaaacatcagtcgttgaaatccaaaacaacgacaatttgtgtctgctgagagccgtca cagtggcctatgcctccacttgtaaacgttctgatgatgaaatacaaagatttaaggaaagtcatcccaccatcgcagag aagcagatgttactggagtacggcatgtgctctaatttatattaccgacgaattaaattaaattatcatggtatacaaga cgacatcacacatcatttggtgtatcggttgaacattgaagggaacaaccccttgacctatcaggtcattccacgacttg aaaatacattcaatgtcaatatttatgtcgtttcttcgaacctagggaattcgttttcttacgtgagttcgagttcagac acggagcgaacaaaactttttgtgtaccacgttagagaagatgatcttgatcattatcacgccatcactaaaatcacagg gtttttcggtcagtcctacttttgcacctcttgtttaaagccttattcacacagagaacatcactcttgtttgacacatt gtaacgtgtgtttgtcgaaccagtgtatcaaagaacgagatacaacatgtccagattgcaatcgcacatgtcggtctgtg acatgttttaatagacacaaaacgatttcggacaagggcagcatgccttgtcaattcttctataaatgtcctgcgtgtca caaaacgttcgaaacgaaaaagttgacacctaaagaccacaaatgtggttactacacgtgtaaatcgtgtcagcaatacg tggcacctgatcatatatgttactcaagatcagtatccgagatggcggtcgaggatcgcaaatacatatttgccgatatc gaggcatcgcagagggacgaaattgttcaatgtaattggggatacgttcctcccagaaataacacgtgttctgagtgtca atatgatcgaatcttttgtcagacgtgtgtcatgtgtaagtattgtttgcgagcagaatgtggtatgggttcgccatgct ctttcaaatactcgccacaaccaagagagcattgtcaagaatgcacatttataagtgataaatgtaaggcgtgtcagaca tgtcagaactgtctgaaatcttcgtgtggtcaaaaacgtcatacagtagtcttagccgtctgtcagacggcttgttctaa atgcgaggataaacccctgaactcccaaagcaagtgcaaatactgtggcagtcgctgtgccatgtgttcaaagagagatg ccaaaactaaacagtttgtgtcgtctccctgcgcacacacttgtggctatcgcgaacttgtttttcgcacattgtacgac ttagggtcctggatctttcacgacaatcacaagggatacactgtcatgtttcataacttgtcttatgacggccagtttct catgcagtatctactttcgcaatcgatgcgaccatctttcgtcatttaccgcggaagtaaaattcaaatgttcaacgtac aaagtttacaaatcagggtcatagattcattcaattttttacccatggccttagccaaattacctaaagcgtttcagctc gacacacttgccaaaggatatttcccacattttttcacgcgtcgagaacatttgaattacgtaggaccctatccgcccgt ccaattctacgctccggatagcatgtccctcgatgacagaagtaaattcttggattggtatcaaaacaaggtcacatccg gggaactatttgattttcaaaaagaaatgatcaagtattgcaagagtgacgtcgacatcttgcgtcgcgcatgcctgaaa tttaaaaacttgttgaatgacgcgaccggaagtgacggaggagttaaagttgacgcatttgctacctgcactatagcttc cctgtgcatggaagttttcaaaaagaaatttctgcgcgaagaatggagagtactcgttggttctcctattgcggacaatg agtctagaaacaatgccactaaacatgttgatgacaaagaggaatggctcaatgctttcaaactgaacggtcaaatgaaa gtctttcatcaaggttgctggaaaaacgcgagcattttcgagcgtcaaaccggactgaaaataaagaagtctttgtttgt ccgatctcccatcgccaggccgccccctaatgggtacgtctcgcaagtcaaattcagcaagaaatcgatacagtggctag aatggctcatgcaccgcgcaagtgtcaaaggtcagatcataaacattcagcacgctcttaacggaaggggagagtacaaa gtgcccggtaccagatactcgttggacgggttcgtagcacctgcagccgatcgccctcaagccatagcttatgaattcaa tggttgtaggtatcacggatgtccaacctgctataaaaacaaagacgatgttctcaatcctaatacgggagcaacggcct ctgaactatttgccctcaccctgatcaaagaagccaaacttcgcgaaatgggattcaaggtcattaaaatctgggaatgt cagtttgattctcaatgccagaaaaatggcaacctccgatcctttatcgaatctttagacctcgaagatcgcttagatcc tcgcgatagtctcatgggtgggcgtacaaacggttcggtcttattcaaaagggccaataccaaatctaaaatcaaatacg ttgactttaccagtttgtacccctttatcaacaagaatgcaaaatatccgctttatcaccctgagatcatcaccggtaat gtcacggacatctcctcctactttggtattgctaaagtcaagattttacccccgcgcggtctgtttcatccggtcttggg ctataagacgggtggaaaattgacatttccgctgtgccgtagctgtgtagagaaacaacagcagaccccttgtcgatgct ccgaagcagatcgttcgtttgtggggacctactgcacgccagaaattgaaaaggcgatcgagaaggggtacaggattctc aaaatttacgagatctaccactggcccgaaactacccagtacgatccgaccaccaagactgggggtctctttgttgagta catcaacatgtttttaaagatcaaacaggaagccagcggtcgtccggaatgggtcaaaacagaggccgatctcgaaaagt acattgaattgtacgaggaaagagagggcatccgtttagacccccaaaacgtcgaattgaacttagggttgaggagtttg gccaaactgctcctaaacagtttttggggtaaatttggccagaggatgaacttgacaaagactcaattcatccatgacac cgaagcccataaactgttcggtcaaatggccgatccaacggtagaactggtcgattttaacatcgtgaacgacgagactc ttatgttatcgaccaaacgaacgtcggaagacgtttgtgaccccggtcacaccaacgtgtttttggccagttttacgaca tgttgggctagactcaaattatatgagttactagacatgttacagactcgagccctttnatactttattgatcatataca caccaattga |
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Protein
| Protein ID | pfu_aug2.0_4576.1_22577.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4576.1_22577.t1 MDPARLLFKEIEEAEWGATSTLNIADNILDDIQNVRVVEHVLYDDIETMEWEQPYDNVADTILDQASNSGSALQSLSDFY DILESSFHDYDSLGKDVDIIPIFDISEYGNVSLQDGGALLNGVQAETLVGGGKKNYEIKLMKEKELKKMGVKDINYELNF KPNMFQQDRKLRDVLGILKDAFGNMIQRVKKDLQPDDIMRAAIHNDALDTPIFIPLKPMQEFSPEMMMDVIVNVLNSQED IPFDSSTRVDIGAIKYPRGGHRHKISNIQRSLKNKTSVVEIQNNDNLCLLRAVTVAYASTCKRSDDEIQRFKESHPTIAE KQMLLEYGMCSNLYYRRIKLNYHGIQDDITHHLVYRLNIEGNNPLTYQVIPRLENTFNVNIYVVSSNLGNSFSYVSSSSD TERTKLFVYHVREDDLDHYHAITKITGFFGQSYFCTSCLKPYSHREHHSCLTHCNVCLSNQCIKERDTTCPDCNRTCRSV TCFNRHKTISDKGSMPCQFFYKCPACHKTFETKKLTPKDHKCGYYTCKSCQQYVAPDHICYSRSVSEMAVEDRKYIFADI EASQRDEIVQCNWGYVPPRNNTCSECQYDRIFCQTCVMCKYCLRAECGMGSPCSFKYSPQPREHCQECTFISDKCKACQT CQNCLKSSCGQKRHTVVLAVCQTACSKCEDKPLNSQSKCKYCGSRCAMCSKRDAKTKQFVSSPCAHTCGYRELVFRTLYD LGSWIFHDNHKGYTVMFHNLSYDGQFLMQYLLSQSMRPSFVIYRGSKIQMFNVQSLQIRVIDSFNFLPMALAKLPKAFQL DTLAKGYFPHFFTRREHLNYVGPYPPVQFYAPDSMSLDDRSKFLDWYQNKVTSGELFDFQKEMIKYCKSDVDILRRACLK FKNLLNDATGSDGGVKVDAFATCTIASLCMEVFKKKFLREEWRVLVGSPIADNESRNNATKHVDDKEEWLNAFKLNGQMK VFHQGCWKNASIFERQTGLKIKKSLFVRSPIARPPPNGYVSQVKFSKKSIQWLEWLMHRASVKGQIINIQHALNGRGEYK VPGTRYSLDGFVAPAADRPQAIAYEFNGCRYHGCPTCYKNKDDVLNPNTGATASELFALTLIKEAKLREMGFKVIKIWEC QFDSQCQKNGNLRSFIESLDLEDRLDPRDSLMGGRTNGSVLFKRANTKSKIKYVDFTSLYPFINKNAKYPLYHPEIITGN VTDISSYFGIAKVKILPPRGLFHPVLGYKTGGKLTFPLCRSCVEKQQQTPCRCSEADRSFVGTYCTPEIEKAIEKGYRIL KIYEIYHWPETTQYDPTTKTGGLFVEYINMFLKIKQEASGRPEWVKTEADLEKYIELYEEREGIRLDPQNVELNLGLRSL AKLLLNSFWGKFGQRMNLTKTQFIHDTEAHKLFGQMADPTVELVDFNIVNDETLMLSTKRTSEDVCDPGHTNVFLASFTT CWARLKLYELLDMLQTRALXYFIDHIHTN |
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