Gene
| Gene Model ID | pfu_aug2.0_443.1_10783 |
|---|---|
| Locus | scaffold443.1 : 150556 ... 193551 : + |
| To GenomeBrowser | scaffold443.1:150556..193551 |
| Genes list of scaffold | scaffold443.1 |
| Synonym | pfu_aug1.0_9.1_43414 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| thioredoxin domain-containing protein 3 homolog | GO:0004550 GO:0005524 GO:0006165 GO:0006183 GO:0006228 GO:0006241 GO:0045454 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_443.1_10783.t2 | 1 | 1 | Thioredoxin | 48 | 143 | 1.2e-09 | 37.7 | 4.3e-13 | 3.2e-09 | 36.4 |
| pfu_aug2.0_443.1_10783.t2 | 3 | 1 | NDK | 194 | 332 | 0.0 | 395.1 | 3.2e-38 | 2.4e-34 | 118.0 |
| pfu_aug2.0_443.1_10783.t2 | 3 | 2 | NDK | 345 | 478 | 0.0 | 395.1 | 3.79752e-43 | 2.8e-39 | 133.9 |
| pfu_aug2.0_443.1_10783.t2 | 3 | 3 | NDK | 480 | 613 | 0.0 | 395.1 | 2.8026e-45 | 2.20004e-41 | 140.8 |
Transcript
| Transcript ID | pfu_aug2.0_443.1_10783.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_443.1_10783.t1 atgagtttgttcactatgggtgatgataatgagaaatcattgatggactaccagcctggtcttcaacagcagggaaagaa tagaaagaagagaaaagggatggcgagaaggaagggagaaatacagctccagcaggagatagagactcaggaagaatggg aggatatgctctcaaaggaggggctatatgtgattgatgtataccaagaatggtgtggaccctgcgtgggcatggtgggc aactttaaaaaggcaaaaaatgaatttggtgatccaattcttaaatttatgaccgccaaagcagacaatattgatgcctt ggagaaatacagaggtcactgtgaaccatgcttcttgttttttgcgggtggcatattggtagcggcaataaggggagcta actcacctaaaattctacggaccatcacagaacaactagcacaggaacacaaagttatggatggtcagtctgagagaaaa gaaatcaaagatccatatattgctcagttagaatcagaggaaaaagtggatgaggaagaagataaggaagaagaagaaga cttggaagccggaaagaaggagtttacagtggcacttatcaagccagacgctgtccaggcaggaaaagtggacgaaatct tggctgacatccaggctaagggaatacaggtgcttaagcatgaggagagaacgctgacagaagacgaagttaaaacgttc tattctcatttacaagaagaggctttcttccccgattttgttcagtttatggccagtggccctagtcatattttagtcct cacaaagggacctacaggagaaaacatcatcaacgaattccgagacctaatcggcccaacttccgtggaggaggctaaag aaacacagccagagagtttacgagccaagcacggagagaaggatttcatgaatgccttacacggcagcagttcggaggat atggctatgaaagagctggctttcttcttcccagactttgttataccagagagagagggtaaacctaaaatacagagaac attggctctcatcagaccagatgccttcaaattacacaaagaagagattttacagaaaattaacgattccggttttgaag ttgcgatgcagaaagaactccaccttacaaaggaaatggcagaggacttctataaggaacatcaaggacaggagtacttt gatgagctcacaactagaatgtcaagtggtccagtgctagcccttgccctggctcgggaggatgcagtagagggatggag gacgatgttaggtcctaaagagttagaggaagctaaagaaaatgatccagatagtttacgtgccaaatttgccgtagagg gaacaataataaatcaactccacggttcagattcagaggaatcagcaaaaaaagaattagaaatgtttttccctatgcag caaacggtagcagtcatcaaaccagacgcttttggcacaaaggatgagatcatagacaagattcacgacgctggtttcag gatagcggcacgtaaagaaacgacactttcacgagaagtcgcggaagaattttactcagatcacaaagataaagattact atcaggatctggtcgagcatatgacaagtggtccaacaatgtttatggtgctatcacgagaagatgccgtagaaggctgg aggtcgattataggtcctaccgacccagataaggccaaagaagaaaacccaaactcattacgagctgcctatggacagag cgttttacaaaatgctattcacggcagttcaaatccagaacatgcccaggaatctatcaaaagaatatttggtgatttac aatttaatgctgatgaagaagaaaaagaacaagcaacgggacaacagcaagaggaggcaggagaaggttcagagcaaaga gatggggaggaaggtcctcagcagcaacttgaggaaggagctcaaaatgaggaaggtcaaatagctcaaaatgaggaatc tcaaaaagaggaatctaatgtacccgaatctgagaatccagacacagagcaaaaagaatcgcctgtggttgcggaaccct cgacaaatgtagctgaagtatcgcccgagtataaaaatgcaatgaaaaaagaagcagcaaaagaggaacagaaaacagaa gagacgcccgctgaaccttcaggaggtgcagaaacgcagcaacaagaacaagagtccaaaccagaagaaaaaccagaaga gaaacaagaaacacaagaagaagctaaagaagaatcaaagagtgaggaggctaagtctgatgaggcccaacaagagcaaa aagcacctaccccagcaccagaggaacaaaaagaagctgaagaagaaaagaaagaagaagaagctaaaccagcagaagaa gagaaaaatgaagaagcagaggagccaaagcaagaagaacagaaaactgaggaggagcagaaaccttctgaagaggagca gaaaccatcagaggagcaaaaaccatcagaggagggaggagaaaccaaacaggaggaggagaaaaaggaggaagagaaac ctgctgaaggctaa |
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| Transcript ID | pfu_aug2.0_443.1_10783.t2 |
| Definition | - |
>pfu_aug2.0_443.1_10783.t2 atgagtttgttcactatgggtgatgataatgagaaatcattgatggactaccagcctggtcttcaacagcagggaaagaa tagaaagaagagaaaagggatggcgagaaggaagggagaaatacagctccagcaggagatagagactcaggaagaatggg aggatatgctctcaaaggaggggctatatgtgattgatgtataccaagaatggtgtggaccctgcgtgggcatggtgggc aactttaaaaaggcaaaaaatgaatttggtgatccaattcttaaatttatgaccgccaaagcagacaatattgatgcctt ggagaaatacagaggtcactgtgaaccatgcttcttgttttttgcgggtggcatattggtagcggcaataaggggagcta actcacctaaaattctacggaccatcacagaacaactagcacaggaacacaaagttatggatggtcagtctgagagaaaa gaaatcaaagatccatatattgctcagttagaatcagaggaaaaagtggatgaggaagaagataaggaagaagaagaaga cttggaagccggaaagaaggagtttacagtggcacttatcaagccagacgctgtccaggcaggaaaagtggacgaaatct tggctgacatccaggctaagggaatacaggtgcttaagcatgaggagagaacgctgacagaagacgaagttaaaacgttc tattctcatttacaagaagaggctttcttccccgattttgttcagtttatggccagtggccctagtcatattttagtcct cacaaagggacctacaggagaaaacatcatcaacgaattccgagacctaatcggcccaacttccgtggaggaggctaaag aaacacagccagagagtttacgagccaagcacggagagaaggatttcatgaatgccttacacggcagcagttcggaggat atggctatgaaagagctggctttcttcttcccagactttgttataccagagagagagggtaaacctaaaatacagagaac attggctctcatcagaccagatgccttcaaattacacaaagaagagattttacagaaaattaacgattccggttttgaag ttgcgatgcagaaagaactccaccttacaaaggaaatggcagaggacttctataaggaacatcaaggacaggagtacttt gatgagctcacaactagaatgtcaagtggtccagtgctagcccttgccctggctcgggaggatgcagtagagggatggag gacgatgttaggtcctaaagagttagaggaagctaaagaaaatgatccagatagtttacgtgccaaatttgccgtagagg gaacaataataaatcaactccacggttcagattcagaggaatcagcaaaaaaagaattagaaatgtttttccctatgcag caaacggtagcagtcatcaaaccagacgcttttggcacaaaggatgagatcatagacaagattcacgacgctggtttcag gatagcggcacgtaaagaaacgacactttcacgagaagtcgcggaagaattttactcagatcacaaagataaagattact atcaggatctggtcgagcatatgacaagtggtccaacaatgtttatggtgctatcacgagaagatgccgtagaaggctgg aggtcgattataggtcctaccgacccagataaggccaaagaagaaaacccaaactcattacgagctgcctatggacagag cgttttacaaaatgctattcacggcagttcaaatccagaacatgcccaggaatctatcaaaagaatatttgaagaagaaa aagaacaagcaacgggacaacagcaagaggaggcaggagaaggttcagagcaaagagatggggaggaaggtcctcagcag caacttgaggaaggagctcaaaatgaggaaggtcaaatagctcaaaatgaggaatctcaaaaagaggaatctaatgtacc cgaatctgagaatccagacacagagcaaaaagaatcgcctgtggttgcggaaccctcgacaaatgtagctgaagtatcgc ccgagtataaaaatgcaatgaaaaaagaagcagcaaaagaggaacagaaaacagaagagacgcccgctgaaccttcagga ggtgcagaaacgcagcaacaagaacaagagtccaaaccagaagaaaaaccagaagagaaacaagaaacacaagaagaagc taaagaagaatcaaagagtgaggaggctaagtctgatgaggcccaacaagagcaaaaagcacctaccccagcaccagagg aacaaaaagaagctgaagaagaaaagaaagaagaagaagctaaaccagcagaagaagagaaaaatgaagaagcagaggag ccaaagcaagaagaacagaaaactgaggaggagcagaaaccttctgaagaggagcagaaaccatcagaggagcaaaaacc atcagaggagggaggagaaaccaaacaggaggaggagaaaaaggaggaagagaaacctgctgaaggctaa |
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Protein
| Protein ID | pfu_aug2.0_443.1_10783.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_443.1_10783.t1 MSLFTMGDDNEKSLMDYQPGLQQQGKNRKKRKGMARRKGEIQLQQEIETQEEWEDMLSKEGLYVIDVYQEWCGPCVGMVG NFKKAKNEFGDPILKFMTAKADNIDALEKYRGHCEPCFLFFAGGILVAAIRGANSPKILRTITEQLAQEHKVMDGQSERK EIKDPYIAQLESEEKVDEEEDKEEEEDLEAGKKEFTVALIKPDAVQAGKVDEILADIQAKGIQVLKHEERTLTEDEVKTF YSHLQEEAFFPDFVQFMASGPSHILVLTKGPTGENIINEFRDLIGPTSVEEAKETQPESLRAKHGEKDFMNALHGSSSED MAMKELAFFFPDFVIPEREGKPKIQRTLALIRPDAFKLHKEEILQKINDSGFEVAMQKELHLTKEMAEDFYKEHQGQEYF DELTTRMSSGPVLALALAREDAVEGWRTMLGPKELEEAKENDPDSLRAKFAVEGTIINQLHGSDSEESAKKELEMFFPMQ QTVAVIKPDAFGTKDEIIDKIHDAGFRIAARKETTLSREVAEEFYSDHKDKDYYQDLVEHMTSGPTMFMVLSREDAVEGW RSIIGPTDPDKAKEENPNSLRAAYGQSVLQNAIHGSSNPEHAQESIKRIFGDLQFNADEEEKEQATGQQQEEAGEGSEQR DGEEGPQQQLEEGAQNEEGQIAQNEESQKEESNVPESENPDTEQKESPVVAEPSTNVAEVSPEYKNAMKKEAAKEEQKTE ETPAEPSGGAETQQQEQESKPEEKPEEKQETQEEAKEESKSEEAKSDEAQQEQKAPTPAPEEQKEAEEEKKEEEAKPAEE EKNEEAEEPKQEEQKTEEEQKPSEEEQKPSEEQKPSEEGGETKQEEEKKEEEKPAEG |
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| Protein ID | pfu_aug2.0_443.1_10783.t2 |
| Definition | - |
>pfu_aug2.0_443.1_10783.t2 MSLFTMGDDNEKSLMDYQPGLQQQGKNRKKRKGMARRKGEIQLQQEIETQEEWEDMLSKEGLYVIDVYQEWCGPCVGMVG NFKKAKNEFGDPILKFMTAKADNIDALEKYRGHCEPCFLFFAGGILVAAIRGANSPKILRTITEQLAQEHKVMDGQSERK EIKDPYIAQLESEEKVDEEEDKEEEEDLEAGKKEFTVALIKPDAVQAGKVDEILADIQAKGIQVLKHEERTLTEDEVKTF YSHLQEEAFFPDFVQFMASGPSHILVLTKGPTGENIINEFRDLIGPTSVEEAKETQPESLRAKHGEKDFMNALHGSSSED MAMKELAFFFPDFVIPEREGKPKIQRTLALIRPDAFKLHKEEILQKINDSGFEVAMQKELHLTKEMAEDFYKEHQGQEYF DELTTRMSSGPVLALALAREDAVEGWRTMLGPKELEEAKENDPDSLRAKFAVEGTIINQLHGSDSEESAKKELEMFFPMQ QTVAVIKPDAFGTKDEIIDKIHDAGFRIAARKETTLSREVAEEFYSDHKDKDYYQDLVEHMTSGPTMFMVLSREDAVEGW RSIIGPTDPDKAKEENPNSLRAAYGQSVLQNAIHGSSNPEHAQESIKRIFEEEKEQATGQQQEEAGEGSEQRDGEEGPQQ QLEEGAQNEEGQIAQNEESQKEESNVPESENPDTEQKESPVVAEPSTNVAEVSPEYKNAMKKEAAKEEQKTEETPAEPSG GAETQQQEQESKPEEKPEEKQETQEEAKEESKSEEAKSDEAQQEQKAPTPAPEEQKEAEEEKKEEEAKPAEEEKNEEAEE PKQEEQKTEEEQKPSEEEQKPSEEQKPSEEGGETKQEEEKKEEEKPAEG |
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