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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_443.1_10781
Locus scaffold443.1 : 115066 ... 124106 : +
To GenomeBrowser scaffold443.1:115066..124106
Genes list of scaffold scaffold443.1
Synonym pfu_aug1.0_2042.1_15687

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_443.1_10781.t1 gi|260826089|ref|XP_002607998.1| hypothetical protein BRAFLDRAFT_120860 [Branchiostoma floridae] 7.0e-22
pfu_aug2.0_443.1_10781.t1 gi|676468896|ref|XP_009058356.1| hypothetical protein LOTGIDRAFT_233566 [Lottia gigantea] 6.0e-19
pfu_aug2.0_443.1_10781.t1 gi|699686011|ref|XP_009903936.1| PREDICTED: coiled-coil domain-containing protein 172 [Picoides pubescens] 7.0e-16
pfu_aug2.0_443.1_10781.t1 gi|543352207|ref|XP_005520945.1| PREDICTED: coiled-coil domain-containing protein 172 [Pseudopodoces humilis] 1.0e-15
pfu_aug2.0_443.1_10781.t1 gi|669271274|ref|XP_008627606.1| PREDICTED: coiled-coil domain-containing protein 172 [Corvus brachyrhynchos] 2.0e-15

Transcript
Transcript IDpfu_aug2.0_443.1_10781.t1
Definition-
>pfu_aug2.0_443.1_10781.t1
atggcgcgaaatttggacgaacttttcaaccaaataatttgttcagagaaacatgctatagaaaggaagacgtatctgtc
agaaacaaaacagaaaataaaagaagaacaacagaaattaaaagagcttgtgaatgaaaactacacgttgaggaaagagt
ttgtcctgaaggtgaggaatttgacagaggcacaagtaaacctaaattttcacgaaaggaaacaagaaatactgtgcaca
aagaagaaaaaactcatcaaagaaaagatccagagtcatgataatatagttaaattgaagaaatgtcttcaggagataag
agagctgtttagctcagacacaactaccttcatgtccaactatggtctacatagtaatggtaggactgaacgggagaggg
aggcccagacaaaattatcacagcttacaaaggaaaaaacacatctggaaaaagaaagagagacatatgaggagttgaaa
gggagggcagatctacttatgatggaaatagacataaaaaagcaagaaattaacaacatgagaacagaaaatgctgaaat
gatgaaggatttaaaagaaaagactgaacagaaatcacaggagaaggaagttctgcaggattaccccagtaaagacccag
aattcttgaggctacataacgagttggagtcttcaaaatcagaaaatttggaagaaagatgttttcatctacagcaggaa
attcagaacttacagcaaaaactatggcagaagcaaatgcagggtagagggaaagtagaaaggacagcggacaaaacacc
cttaaaggcaaaacaaaagcaaagtagccctccaaagaccaacagaatgtgtgtatcaaacttcaatcagcctacagaaa
acaccataagccacaattctgataataaggaaaatgagacaggatacagccaggaggaactgaaagatttgttcttggca
gaaatggacaccaccttgctctag

Protein
Protein IDpfu_aug2.0_443.1_10781.t1
Definition-
>pfu_aug2.0_443.1_10781.t1
MARNLDELFNQIICSEKHAIERKTYLSETKQKIKEEQQKLKELVNENYTLRKEFVLKVRNLTEAQVNLNFHERKQEILCT
KKKKLIKEKIQSHDNIVKLKKCLQEIRELFSSDTTTFMSNYGLHSNGRTEREREAQTKLSQLTKEKTHLEKERETYEELK
GRADLLMMEIDIKKQEINNMRTENAEMMKDLKEKTEQKSQEKEVLQDYPSKDPEFLRLHNELESSKSENLEERCFHLQQE
IQNLQQKLWQKQMQGRGKVERTADKTPLKAKQKQSSPPKTNRMCVSNFNQPTENTISHNSDNKENETGYSQEELKDLFLA
EMDTTLL

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