Gene
| Gene Model ID | pfu_aug2.0_429.1_30752 |
|---|---|
| Locus | scaffold429.1 : 199590 ... 214616 : + |
| To GenomeBrowser | scaffold429.1:199590..214616 |
| Genes list of scaffold | scaffold429.1 |
| Synonym | pfu_aug1.0_6844.1_09446 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_429.1_30752.t1 | 5 | 1 | fn3 | 303 | 380 | 9.94922e-44 | 147.3 | 5.8e-08 | 0.00029 | 20.9 |
| pfu_aug2.0_429.1_30752.t1 | 5 | 2 | fn3 | 402 | 483 | 9.94922e-44 | 147.3 | 8.2e-16 | 4.1e-12 | 46.0 |
| pfu_aug2.0_429.1_30752.t1 | 5 | 3 | fn3 | 497 | 576 | 9.94922e-44 | 147.3 | 6.2e-19 | 3.1e-15 | 56.0 |
| pfu_aug2.0_429.1_30752.t1 | 5 | 4 | fn3 | 606 | 677 | 9.94922e-44 | 147.3 | 1.6e-07 | 0.00081 | 19.4 |
| pfu_aug2.0_429.1_30752.t1 | 5 | 5 | fn3 | 700 | 730 | 9.94922e-44 | 147.3 | 0.00065 | 3.2 | 7.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_429.1_30752.t1 | gi|751445319|ref|XP_011176699.1| | PREDICTED: tyrosine-protein phosphatase Lar isoform X6 [Bactrocera cucurbitae] | 2.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_429.1_30752.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_429.1_30752.t1 atggactggatatttattacagctctctgtttgttagttcccttatcacatggacagttagggtcagtgggtcaaccccc acaaggtgcacagatttcacaggcagcacaatttgcacaaggaggagcacaaccaaccggctttccccaaagcggagcac aaatatcgtcatcgttctcacaacagggtgtagcacaaggatcacaactctcccaagggggaggtcaactatcccagggt ggagcccaaatatctcaatatcccgtaggtggacctcaagcaactcagttcccacttggtgcaacacaaggagcacaaat ttctcagggtgctccgcaaggcggactattttcccaaggatcacaatttccacaaggtgcgccacagggagggcaattta cacaaggttcccaacagagtgcacagtttcctcaaggtgcacaacagggagggcaatttacgcaaggtgcgccacaggga gggcaatttacgcaaggtgctccacagggagggcaatttacgcaaggtgttcctcagggtgcacagtttccgcagggtat gtcacaaggtgttcaataccctccagcaatgccacaaagaccggagattccgcaaacatggccaacggataaattcatgc aaattgaaagtaatctaggacagttaaaaatgtatgttcaatctttacaggaccttgtatatcaagaaagaatgaaatac ccagcaccatatcctcaaaatataacagctgcacctgttgacctatcctatacgaactttgttaacgatgctgatatgag attagatgctatgaagaacgtcacagaacgacttgttctgcttatgaatacatgtgcacgtggacttgaacctccttcga tcccacggaacataatggtccaatctgagactgtggacaacacatcaaacatctttgtcagctgggacccaccaatgttg acgggaatgcctcaggttgacgataatcttcactacaaagtttatttctccccggtagatgagtatggacagcctacagg agggcaaatgctatttagaatctgtgacgcaaattcaacgcaagcctccgtgacagacctctccccaaggtcgtattata gtataagaatagcagcggcacattgcctgtctgttgaatctgaaggtgatccaaccctcgtcaggacccttgatatcata ccatccgctcctttgaacgtaagaatcgagggtaagaaagccaatgccatcgctgtcggctgggatcctcctgcagtgat gggaacactcaccaattataccatctatgtcggcgaggaatcaggcccggtaactacggtggcagttgatccatccatta ctacttacgctatttatgacctttatgaaggaacgatgtataacgttcaggtgtcggcatcatccgacaatggtgaaagt cccaaaagtcaacctatacaagtgataactgatgcttatgtaccaatggcaccaagaaacttaagggcgatcgaccataa cttgacgtcagtgaccttaaggtgggaccccccgactgctggacccggaatgattagaggttacagagtcaatttcacta cagacacaggatttgataactaccaggaggtgctgacgtcaggtccgtcagatactcaagtcactattacagggctcgct ccggccacgttgtactacttccaagtttatgctcgtactatgaagaggctcggcatggggagtgcagttatattgaatat gacaaaagcagatgttccatctaagccaatgtcggttatgcatcagttggtggacaatggcctacaaacaatccagctgt catggcaaccaccgaataacacgtatggcccgatactcaagtatgttcttcactggggtgtcaggggcggagctactaga aaggaaaatctaactgcttacattctgacttggtcctcagatttactagatgataataccactcacgatttcaagctatc tgctgtcaacgaactcggcgaaggagaaccaacttatctcagcatccgcaccaaagccaaacctcaaattattccaccaa atgttcgagtaacaagacgaaaaggcagaggattgaatccaacaacgctaaaggtcacgtggggaaccccgaaaattcct gttgatggattctggatcctgtaccgaaagttcgaatgggtttataccggtagatggcagcttatgaccatcgaagaccc gaccgcaagatctgctgaaatatctgtacccgaagaaaaagtgtcatacattgtcgtgtgtaaaggatttgtaaaagaaa agaagacaaccgccaatccaggggcattctcatttccaggtgtcggaaatcaacaaccatacccaccatccggggccttt ggtctctag |
|
Protein
| Protein ID | pfu_aug2.0_429.1_30752.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_429.1_30752.t1 MDWIFITALCLLVPLSHGQLGSVGQPPQGAQISQAAQFAQGGAQPTGFPQSGAQISSSFSQQGVAQGSQLSQGGGQLSQG GAQISQYPVGGPQATQFPLGATQGAQISQGAPQGGLFSQGSQFPQGAPQGGQFTQGSQQSAQFPQGAQQGGQFTQGAPQG GQFTQGAPQGGQFTQGVPQGAQFPQGMSQGVQYPPAMPQRPEIPQTWPTDKFMQIESNLGQLKMYVQSLQDLVYQERMKY PAPYPQNITAAPVDLSYTNFVNDADMRLDAMKNVTERLVLLMNTCARGLEPPSIPRNIMVQSETVDNTSNIFVSWDPPML TGMPQVDDNLHYKVYFSPVDEYGQPTGGQMLFRICDANSTQASVTDLSPRSYYSIRIAAAHCLSVESEGDPTLVRTLDII PSAPLNVRIEGKKANAIAVGWDPPAVMGTLTNYTIYVGEESGPVTTVAVDPSITTYAIYDLYEGTMYNVQVSASSDNGES PKSQPIQVITDAYVPMAPRNLRAIDHNLTSVTLRWDPPTAGPGMIRGYRVNFTTDTGFDNYQEVLTSGPSDTQVTITGLA PATLYYFQVYARTMKRLGMGSAVILNMTKADVPSKPMSVMHQLVDNGLQTIQLSWQPPNNTYGPILKYVLHWGVRGGATR KENLTAYILTWSSDLLDDNTTHDFKLSAVNELGEGEPTYLSIRTKAKPQIIPPNVRVTRRKGRGLNPTTLKVTWGTPKIP VDGFWILYRKFEWVYTGRWQLMTIEDPTARSAEISVPEEKVSYIVVCKGFVKEKKTTANPGAFSFPGVGNQQPYPPSGAF GL |
|