Gene
| Gene Model ID | pfu_aug2.0_429.1_30748 |
|---|---|
| Locus | scaffold429.1 : 108886 ... 115497 : + |
| To GenomeBrowser | scaffold429.1:108886..115497 |
| Genes list of scaffold | scaffold429.1 |
| Synonym | pfu_aug1.0_5121.1_01903 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_429.1_30748.t1 | 12 | 1 | LRR_4 | 50 | 76 | 0.0 | 248.2 | 1.2e-07 | 0.00026 | 20.5 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 1 | LRR_8 | 61 | 119 | 0.0 | 185.3 | 2.1e-11 | 4.4e-08 | 32.7 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 1 | LRR_7 | 61 | 76 | 4.0e-21 | 71.3 | 0.0033 | 7.0 | 7.3 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 1 | LRR_1 | 62 | 76 | 2.1e-36 | 118.3 | 0.0051 | 11.0 | 6.5 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 2 | LRR_4 | 86 | 124 | 0.0 | 248.2 | 6.9e-10 | 1.5e-06 | 27.7 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 2 | LRR_1 | 86 | 106 | 2.1e-36 | 118.3 | 0.0034 | 7.3 | 7.0 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 2 | LRR_7 | 86 | 95 | 4.0e-21 | 71.3 | 2.0 | 4200.0 | -1.1 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 3 | LRR_7 | 107 | 123 | 4.0e-21 | 71.3 | 0.015 | 32.0 | 5.3 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 3 | LRR_1 | 108 | 126 | 2.1e-36 | 118.3 | 0.0097 | 20.0 | 5.6 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 2 | LRR_8 | 131 | 188 | 0.0 | 185.3 | 1.6e-11 | 3.3e-08 | 33.1 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 4 | LRR_1 | 132 | 152 | 2.1e-36 | 118.3 | 0.00086 | 1.8 | 8.8 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 4 | LRR_7 | 134 | 146 | 4.0e-21 | 71.3 | 0.18 | 390.0 | 2.0 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 3 | LRR_4 | 135 | 169 | 0.0 | 248.2 | 1.8e-09 | 3.9e-06 | 26.3 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 5 | LRR_1 | 154 | 171 | 2.1e-36 | 118.3 | 0.24 | 510.0 | 1.4 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 5 | LRR_7 | 154 | 168 | 4.0e-21 | 71.3 | 0.043 | 90.0 | 3.9 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 4 | LRR_4 | 177 | 212 | 0.0 | 248.2 | 3.6e-07 | 0.00076 | 19.0 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 3 | LRR_8 | 178 | 217 | 0.0 | 185.3 | 3.5e-05 | 0.075 | 12.7 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 6 | LRR_1 | 178 | 197 | 2.1e-36 | 118.3 | 0.016 | 33.0 | 5.0 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 6 | LRR_7 | 178 | 192 | 4.0e-21 | 71.3 | 0.099 | 210.0 | 2.8 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 4 | LRR_8 | 201 | 257 | 0.0 | 185.3 | 1.4e-08 | 3.0e-05 | 23.6 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 7 | LRR_1 | 201 | 216 | 2.1e-36 | 118.3 | 0.0045 | 9.5 | 6.6 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 7 | LRR_7 | 201 | 215 | 4.0e-21 | 71.3 | 0.021 | 44.0 | 4.9 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 5 | LRR_4 | 223 | 261 | 0.0 | 248.2 | 2.7e-10 | 5.6e-07 | 29.0 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 5 | LRR_8 | 223 | 280 | 0.0 | 185.3 | 1.9e-09 | 4.0e-06 | 26.4 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 8 | LRR_1 | 224 | 244 | 2.1e-36 | 118.3 | 0.0017 | 3.7 | 7.9 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 8 | LRR_7 | 224 | 237 | 4.0e-21 | 71.3 | 0.078 | 170.0 | 3.1 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 9 | LRR_1 | 247 | 266 | 2.1e-36 | 118.3 | 0.031 | 65.0 | 4.1 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 9 | LRR_7 | 247 | 261 | 4.0e-21 | 71.3 | 0.036 | 76.0 | 4.2 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 6 | LRR_4 | 269 | 307 | 0.0 | 248.2 | 2.2e-09 | 4.6e-06 | 26.1 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 6 | LRR_8 | 269 | 326 | 0.0 | 185.3 | 1.7e-09 | 3.6e-06 | 26.6 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 10 | LRR_1 | 270 | 290 | 2.1e-36 | 118.3 | 0.0011 | 2.3 | 8.5 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 10 | LRR_7 | 270 | 284 | 4.0e-21 | 71.3 | 0.52 | 1100.0 | 0.7 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 7 | LRR_8 | 293 | 349 | 0.0 | 185.3 | 1.5e-09 | 3.2e-06 | 26.7 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 11 | LRR_1 | 293 | 311 | 2.1e-36 | 118.3 | 5.6e-05 | 0.12 | 12.5 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 11 | LRR_7 | 293 | 307 | 4.0e-21 | 71.3 | 0.0011 | 2.3 | 8.8 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 12 | LRR_7 | 314 | 330 | 4.0e-21 | 71.3 | 0.016 | 34.0 | 5.2 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 7 | LRR_4 | 315 | 353 | 0.0 | 248.2 | 9.8e-10 | 2.1e-06 | 27.2 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 12 | LRR_1 | 315 | 336 | 2.1e-36 | 118.3 | 0.0015 | 3.2 | 8.1 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 8 | LRR_8 | 338 | 394 | 0.0 | 185.3 | 1.2e-10 | 2.5e-07 | 30.3 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 13 | LRR_7 | 339 | 353 | 4.0e-21 | 71.3 | 0.048 | 100.0 | 3.8 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 13 | LRR_1 | 340 | 358 | 2.1e-36 | 118.3 | 0.014 | 29.0 | 5.2 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 8 | LRR_4 | 362 | 399 | 0.0 | 248.2 | 1.2e-08 | 2.5e-05 | 23.7 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 14 | LRR_1 | 362 | 382 | 2.1e-36 | 118.3 | 0.0023 | 4.9 | 7.5 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 14 | LRR_7 | 362 | 376 | 4.0e-21 | 71.3 | 0.59 | 1300.0 | 0.5 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 15 | LRR_1 | 385 | 404 | 2.1e-36 | 118.3 | 0.012 | 25.0 | 5.3 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 15 | LRR_7 | 385 | 399 | 4.0e-21 | 71.3 | 0.18 | 390.0 | 2.0 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 9 | LRR_4 | 406 | 444 | 0.0 | 248.2 | 6.7e-09 | 1.4e-05 | 24.5 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 9 | LRR_8 | 407 | 462 | 0.0 | 185.3 | 1.1e-08 | 2.4e-05 | 24.0 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 16 | LRR_7 | 407 | 422 | 4.0e-21 | 71.3 | 0.48 | 1000.0 | 0.8 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 16 | LRR_1 | 408 | 426 | 2.1e-36 | 118.3 | 0.00077 | 1.6 | 9.0 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 17 | LRR_1 | 430 | 449 | 2.1e-36 | 118.3 | 0.083 | 180.0 | 2.8 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 17 | LRR_7 | 430 | 439 | 4.0e-21 | 71.3 | 1.8 | 3800.0 | -1.0 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 10 | LRR_4 | 452 | 490 | 0.0 | 248.2 | 6.6e-10 | 1.4e-06 | 27.7 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 10 | LRR_8 | 453 | 505 | 0.0 | 185.3 | 3.4e-08 | 7.2e-05 | 22.4 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 18 | LRR_1 | 454 | 472 | 2.1e-36 | 118.3 | 0.0069 | 15.0 | 6.1 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 18 | LRR_7 | 454 | 468 | 4.0e-21 | 71.3 | 0.24 | 510.0 | 1.7 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 19 | LRR_7 | 476 | 488 | 4.0e-21 | 71.3 | 0.012 | 25.0 | 5.6 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 19 | LRR_1 | 477 | 495 | 2.1e-36 | 118.3 | 0.0012 | 2.5 | 8.4 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 11 | LRR_8 | 523 | 581 | 0.0 | 185.3 | 5.7e-08 | 0.00012 | 21.7 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 20 | LRR_7 | 523 | 539 | 4.0e-21 | 71.3 | 0.0096 | 20.0 | 5.9 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 11 | LRR_4 | 524 | 559 | 0.0 | 248.2 | 6.5e-06 | 0.014 | 15.0 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 20 | LRR_1 | 524 | 541 | 2.1e-36 | 118.3 | 0.0082 | 17.0 | 5.9 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 21 | LRR_1 | 547 | 567 | 2.1e-36 | 118.3 | 0.25 | 530.0 | 1.3 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 12 | LRR_4 | 569 | 604 | 0.0 | 248.2 | 3.3e-09 | 7.1e-06 | 25.5 |
| pfu_aug2.0_429.1_30748.t1 | 12 | 12 | LRR_8 | 570 | 608 | 0.0 | 185.3 | 2.4e-07 | 0.00051 | 19.7 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 22 | LRR_1 | 571 | 591 | 2.1e-36 | 118.3 | 0.00013 | 0.27 | 11.4 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 21 | LRR_7 | 572 | 585 | 4.0e-21 | 71.3 | 0.0056 | 12.0 | 6.6 |
| pfu_aug2.0_429.1_30748.t1 | 22 | 22 | LRR_7 | 592 | 606 | 4.0e-21 | 71.3 | 0.00098 | 2.1 | 8.9 |
| pfu_aug2.0_429.1_30748.t1 | 23 | 23 | LRR_1 | 593 | 606 | 2.1e-36 | 118.3 | 0.055 | 120.0 | 3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_429.1_30748.t1 | gi|676434969|ref|XP_009047405.1| | hypothetical protein LOTGIDRAFT_82271, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_429.1_30748.t1 | gi|524886717|ref|XP_005099951.1| | PREDICTED: leucine-rich repeat and death domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_429.1_30748.t1 | gi|585670256|ref|XP_006817830.1| | PREDICTED: leucine-rich repeat and death domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_429.1_30748.t1 | gi|557012968|ref|XP_006007034.1| | PREDICTED: leucine-rich repeat and death domain-containing protein 1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_429.1_30748.t1 | gi|512850600|ref|XP_002934640.2| | PREDICTED: leucine-rich repeat and death domain-containing protein 1 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_429.1_30748.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_429.1_30748.t1 atggaatctgacgtcaaagtcgagcagcctcccaaaaaggacgaggatgacaacccggaccgtgttcatgtctctataga accagataaagaagtcgtgtcagaagcgggacctcttacaaacggagaagttgacgtgacgcaggcgctgaccgaattac ccaatgaaataggacaatttcctcacctggaaactttgattttgtcacacaacaagcttcggacgataaatcgggcagtt tatctaaattacgagctgagattgctggacatttctgaaaatgaagtatccgtgatttctccagatatttcaagcttgac aaagctgcaagagttggtcgccaatagcaaccacatagaagagcttccgccgaggattggagaaatggaagagttgtcgt tattagttctgagtgataatcagatacgcaaaatccctgattccatacaaaaattaaggaatcttaaagtgctggcacta gaacgaaatgcattggaatatttgaaccccgaggtgtgcaaaattgaagaattagtacggcttggtctatctggaaacca tattgcaaatttacctcgcgaggtagagaatttcgtcgccctcgaagagctttatctagatgataatgagtttgaattta ttcccgtgcaggtcctttggttggacacattgcatacgctagtgatgtccggaaatcgtctgcgtcagatccaacctgaa atagcaaatcttaagggactggcagtgttgggactgaataataacgaaatagaggcaatacccgaagaactctgcaatat tgaaggtctggaaattcttggacttgaaaacaacaagatttcaagaattccagacaacattgctaatttgtacgagctac gggaactctatcttgggaacaatgacattgaaacaatcccagaaaatttgtgctggtgttcaaatcttgagattctgagt ctcttaaataacaaaatatcagaattccccgtcgagatagaaaatttacgccgtgttcacactctagtcttgtcaagcaa caaattcaagaagctcccggaagcgctggggactttacatgatcttgagattctgtcagcagacgacaaccagctgtctg atataccgtcagacgtttccggactgaggcatatccaacaactcagtttgagtaaaaatgcattcacaaaatttccagtt tctgtatgctccctgaagacacttgaaattttagatctccggaaaaacgagattccggaaattccgtctagaatcgcgga gcttgatcgtctgacgtccttgtacatgggtaataacgtcgtcaacaatttcataccggagttatgcggcatgacggaac tccagcttttagaccttgccaataacatcgtcgaggaaattcctgaggcaatttctcagatgaccggacttgaggatctg gatatttcccacaatcgtttcctggaatttccgaaatctgttttggctttggaaaaattggagcgactcaccttcgacca atcagaaggacatccggttccttcacttccggatgaaatcgaattttcaaatttgtcctacctaattgtgtcaaataaca ctctgcgcactttaccgaatacaataaatggcatgaaaaatatcaaatctatcgtcgcaagcttcaatgaaatcagtata ttgccgaaatcaatctgtgacttgacacaaattgaaattcttcatcttaatgacaacaaactgacgtcacttcctgaaaa ctttgatcgtctgagcaatttgaaagatcttcgtctccataacaaccccctgagaactccaccaatggacgtctgtgtta gtggcgtggtccagccaataggaagattcattcgaagggctgtagaaagagaggacatcctgatgctgaaaatgtttgac atcctcaaagtctcaatgaacaaacacgagcttcgttacttgctgaagaagttcaggttcccggatgagaaaatatcgga actggaccagatgtaccatggcaaagacaaacttccggacaggatatacaatgccctcttgttttggcgggaattcaaag gtccaatggccaccatagaagaactacttcgagttttccatatcattggttatgaggacattacagctaaactcaggaca gtgaaaatatttgcccagagaccgaggttctag |
|
Protein
| Protein ID | pfu_aug2.0_429.1_30748.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_429.1_30748.t1 MESDVKVEQPPKKDEDDNPDRVHVSIEPDKEVVSEAGPLTNGEVDVTQALTELPNEIGQFPHLETLILSHNKLRTINRAV YLNYELRLLDISENEVSVISPDISSLTKLQELVANSNHIEELPPRIGEMEELSLLVLSDNQIRKIPDSIQKLRNLKVLAL ERNALEYLNPEVCKIEELVRLGLSGNHIANLPREVENFVALEELYLDDNEFEFIPVQVLWLDTLHTLVMSGNRLRQIQPE IANLKGLAVLGLNNNEIEAIPEELCNIEGLEILGLENNKISRIPDNIANLYELRELYLGNNDIETIPENLCWCSNLEILS LLNNKISEFPVEIENLRRVHTLVLSSNKFKKLPEALGTLHDLEILSADDNQLSDIPSDVSGLRHIQQLSLSKNAFTKFPV SVCSLKTLEILDLRKNEIPEIPSRIAELDRLTSLYMGNNVVNNFIPELCGMTELQLLDLANNIVEEIPEAISQMTGLEDL DISHNRFLEFPKSVLALEKLERLTFDQSEGHPVPSLPDEIEFSNLSYLIVSNNTLRTLPNTINGMKNIKSIVASFNEISI LPKSICDLTQIEILHLNDNKLTSLPENFDRLSNLKDLRLHNNPLRTPPMDVCVSGVVQPIGRFIRRAVEREDILMLKMFD ILKVSMNKHELRYLLKKFRFPDEKISELDQMYHGKDKLPDRIYNALLFWREFKGPMATIEELLRVFHIIGYEDITAKLRT VKIFAQRPRF |
|