Gene
| Gene Model ID | pfu_aug2.0_429.1_30747 |
|---|---|
| Locus | scaffold429.1 : 45686 ... 106695 : - |
| To GenomeBrowser | scaffold429.1:45686..106695 |
| Genes list of scaffold | scaffold429.1 |
| Synonym | pfu_aug1.0_82.1_21965 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_429.1_30747.t1 | 1 | 1 | DUF4339 | 968 | 1013 | 1.9e-12 | 46.5 | 1.3e-15 | 4.9e-12 | 45.2 |
| pfu_aug2.0_429.1_30747.t1 | 1 | 1 | DnaJ | 1295 | 1351 | 1.1e-15 | 57.1 | 9.1e-19 | 3.4e-15 | 55.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_429.1_30747.t1 | gi|637311857|ref|XP_008110980.1| | PREDICTED: dnaJ homolog subfamily C member 13 isoform X1 [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_429.1_30747.t1 | gi|637311865|ref|XP_003222244.2| | PREDICTED: dnaJ homolog subfamily C member 13 isoform X2 [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_429.1_30747.t1 | gi|564239721|ref|XP_006276704.1| | PREDICTED: dnaJ homolog subfamily C member 13 [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_429.1_30747.t1 | gi|557274863|ref|XP_006020687.1| | PREDICTED: dnaJ homolog subfamily C member 13 [Alligator sinensis] | 0.0 |
| pfu_aug2.0_429.1_30747.t1 | gi|670981808|ref|XP_008706867.1| | PREDICTED: dnaJ homolog subfamily C member 13 [Ursus maritimus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_429.1_30747.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_429.1_30747.t1 atgtctgggttaaaggagaacaaagatatatcttgttacttcataaccaaacactcatggaaaggaaagtataagagaat attttccgtaggcacgcatggaataacaacgtacaacccacagtctttagaagttaccaatcaatggccgtacggtgaat ttgtcagtatagtgccgaacgtgaaggcccctaacaacaatgagttcatcattacgatgaaaaaaggccccaagaaaaca gaatccatgaaattctccactgatcatagggccgatctgctgaccgaagctctgagatttcggaatcagtttgctgaagt aaacaatacctcaaagagatttaatgcattcaaacaccactggtcagacaacagggtgtcggttgtcctggaggtcaacc aggggtcactggaccagatagaggcgtctacaaatagaaaactctgctcctacgactacaaagatatggaagggctgtgt cagatatcagattatccagggggagtggcggtcattcatgggggattcagcagactgcatttatttgcgatagaacaacg tgatggttttataaagtgtgtgatggaggcagcggcagcttacgtgggagtggtcgtcaaacagaggagagaaccaatca catttgagcaatttgtcaacaacagaatgggaaaatacagcactgatgaagctatgacgtcatacgccgagtttatggta cagaagatttctccgcggcacacagatcacgtcaggcggacattatgtctgacggaatcttgcttggtggagagggaccc ggccacttacaatgctgtcacatcaaaaccactctgtgatatatttgccattataagagatcaggagaatccccagaaat tcagtgtagagtacgtgaaaggtgccgttagaacttacttatctacagacagagatgccctaatagcatcagtgttagat ggagttcgagcgtcagggaatagagatgtgtgcattaagatgatggtgacgtcacgaggttacagactcggtcctttcac cgtccctgtagatgaggaagtagaaagtcagcatctgaaattcatacatcaacctccagtgggtatgacgtttgaggaat gtgtatcgaggtttaacagtaacatttcttacagcggtctcctacatgctgtcacacaagacggtctatttgctgagaac aaagagaagttgatcaatggtgcattgttaagtcttctggaaaaagaaggggaccagaatgttatatcagcagagaatct agaggggcagttccatgccttaagaaggctggtcgcctccaaagctgggtttgaagccttcacaaaacttccaaaaatga gagagaaagtaggcgtaaaggttgtgaagtcaatgaagcgtaaagacacaggggtgactcatgccgctttagacgtactg tgtgcactcatgcagcccatgcacgatgactatgacttacgtcaagaacaactgaacaaatactcgttactgtcgtccaa aaaattcctggagactctgctagatactttcaaagaccatgtggtacacagtacaggtgctcttgttatatcttccatgc ttgactttttgacctttgctctttgtgcaccgtacagtgaaacaacagacggaactcagtttgacacgctcctggaaatg gtggctacaaatggccgtatcgttttcaaactgtttcagcatccctcaatggctattgtcaaaggagctggtctggtaat gaaagccattatagaggagggagatgcggaagtagctgctaagatgcaggatttagcgctatcagagggggcattaccca aacatctacataccgccatgtttacacaaagctcagataataggatgctcacaataaggcagcttagtcgacatttagta ggattatgggtaactggccatccgactgccatgggattactgaggagatgtctgcctcctggattattgtcatatatgga ctccacagacgaagtgccgatacatgagacagataagctgcatgtcagagacaatgtgaagcttgcacaggacatccaaa atagaaatcggaaaaacccaaacctggtgatgatcgagaaaaaaattgatgaattccttcaacactggagagctcgaatt ggtctacagaaaaacaaacagcaaaatgaattaaaacctgtgacacttagaaagagacgacagcgtatcaaaagtgaggc aaattggcaactgttttactaccagttcaacagagatcatgcaaaaccaaaccttatatggaactacaaaaccagagagg aggtgcgagaggcattagagaacgagatgagggcatttaacgtggatcgtgagctcggagcaaattgtgtagtaggctgg aatcatcaggagtttgaagtaccgtatcactgtctgtctgatgagattaaaataggtgactactaccttagacttttgtt agaggaaggtgaggacgaatcagaggaaactagtgccatcaaaaaatcatatgagtttttcaatgatttgtatcatcgat tcctactgacgcccaagatacagatgaagtgtatgtgtctacaggcaatgaccattgtctatggaaaatgtcacgaagaa attggagctttcaacgatactcgatatattgttggaatgttggaaaggtgtacagacaaactggagagagatagactggt tcttttcctcaacaaactcatcctacatcctaaaaatgtgaaggagataatggacgcaaatggtataaaagtattggttg accttttgaccttagctcatttacatacatccagggcaacagttcctttacagaccaatgtaatagaagcctcaccagat atgagcagggacagtgagaaggaatggtattatggcaacaaagataaagaaagattagggccgtacagctttgatgagct caaatcaatgtggaaagaggaaacaatacacagtaagactcgatgctgggcccagggtatggacgggtggcgccccctac agggaataccccagctgaagtggaacctactggccacaggtcaagccgtgatgaatgagagtgacctagcttccttaata ctcaacatgctgatcaggatgacagagtactaccctagccgggacgtagatggtgcaatagtacggccactgccgaggat gaaacgtatgttatctgaccctgtctgtctccctcatattgtacagttgctcttgacctttgaccctatcttggtggaga aggtcgccctagttctattcctggtaatgcaggacaaccccaacatatcacggctttatttaacgggcgtctttttcttc atactcatgtacactgggtccaacgtcctgcccgtggcacgattcctcaaatatactcatatgtctcaggcatttaggtc agacgagaacaaaggttcggacattatgacacgtagtgttctaggtcatatgcttccggaggccatggtttgttacctgg agaattattccgcagacaaattcgcccagattttcctcggagagtttgatactccagaggctatttggaacagcgagatg aggcgacttatgatcgagaagatagcgtcacacttggctgatttctcaccgcgcctatacagtaacacacgagccatgta ccagtactgtcctatacctgtgatacaattcccgcaacttgaaaatgaacttttctgtaatatatattacctgaagcatc tctgtgatacaacaaaattccctgattggccgatcaaagacccggtcaaacttttaaaagacattttagaggcatggaag aaagaagtagagaagaaaccacctactatgtctatagaccaagcttatgaagttttaaacttgaagaaaggagttggggg ccatgaagaatcaaagattcgtaaagcatactttaagttggctcaaaaataccatccagacaaaaacccagacggaaggg aaatatttgagcaagtgaacaaagcatatgaattcctatgtagtaaatccaagcttacagaaggcccggatccacaaaac attgtgctgatcctgagagcccagtccattctcttcaaacggtataaggaagaattggagccgtataaatacgctggcta tcccatgttaatcaaaaccattaagatggaaacacacgatgatgcgctgttctctaaatcggctccgttacttgctgccg cggcagaactggcgtatcacacagtcaactgctcagcattaaatgcagaggagctccgaagggaacaaggaatacagtca ttacaagaagcctttgcacgatgtattaacgtcattagtataaccagcaagcctgaagacactgcagttcaggtatgctt acatatagtcaagtgttacgccgtagcgtcacaattcgagggatgcagggagaagattcaagaaattccggccattatca aagatatttgtagaattctattttacaagaatttaccccagctatgttcagtggtagcggagtgtattagtgctttttca gtggacttttggttacaaacaaacttatttcaatcaggagttttgtggcatttactattgtacttatttaattatgacta cactctagaggagggaggtgtggagaaaagtggcgaatctaatcaacaggaagtatgtaacaatttagctcgtctgtgtg tgagggcgtgtgcacgccttggagggtacctgcccgagagctcaggtctagccacacccgaaaacgttcctgtgaagaaa tcagttacagccatgctcaccccttatctgtccaggaaactagccaatgaaagtccatctgagggtgaatgcgacaaaga gtatggagcaacgtttttatttgacattcacgccaaagaactcattgtaggagaaatatttgttagaatctacaatgaac aatcaacattcccattagagaatgccaaaggctttacgatagatctcctggattacctgggaagtcaagcacagtatcta cactctctgatgatgcttaagaagaacgacacgtctagtcaggcaaagcaggggacacgactcttacacgtagaaatggc attagaggccctccgcaatgtcattaaaaataatccaggtgtagaaatccagtgtataggtcactttaagttattattct gtctcctacggttagacgactgtgccaaactacaacagtacgctttggaggtagtcaacagcgttacaaccaatcaggaa tgtgtaaacgacatagcagcatcagaagtactgggttatctcctcttggcaatcaacagtctaccaaactgtcagatact tacattggagagtttgtttggtctgatgtccagtacaaagatcgttaaggaagctctcattaaaggtgctccagtctact tactagacttgtttgccaatgcgtcatttccgaacgtccgagagaaaacggcagaacttatggccaagatgctggcagac aagctggtcggaccgaagctccgtattattctgtctaagttcctgccggggatatttatggacgccatgagagactcacc ggaggccagtgttcatatgttcgagggtacacatgaaaatccagagttgatatggaatgacgaatcaagagaaaaggtgt cagacacagtcaaaaagctgaaagacaggcattaccttgctcagcgtgacaatgccgacgcccgatggacgctgagtgaa gacttcgctgtagtttatacagacgtggagggagaactcacaattggaggggttttcctgcgtctgtttatagccaatcc tggatgggtgctacgcaaaccaaaggaattcctcacagaactaatggagaaatgggtccaactgatcaacatgcaaaacc ctgatggtgaggtgctagagacagtgaccacaggagttgtgtgccttttctcgtcacagtcggccatgttggatcaggtt ccgtcactcgggtacataccgaaagtctttcatgcaatgagtcacaaaaacaatgccgttacgaagagtgctatccaagt tgctcatcaactagctagtaatgaaatatgtatacgcagtatggcccagatagactgtatcggcccgtttaaggttggca tgaaggcccgacgtgatcaaatcgccctggcagcggaggcattgtccaagatgtttgacaagggagaagatgagctagtc gcacaagctataaacacagacctagtcccattcctgcttaagctactagagggtggtttggaggcgctcgataaaccggc agcaactaaagcccagatagttaaggcactcaaggccatgcagcgtagcttccagtatggagagcaggtaacaaccattt tggaaaaatctccagtttggcgggagtacaaggaccaaaagcacgatctcttcatttccgatacgccgatagccggctat cttacaggtcccactggtcccagtgtagctggatacctgacgtccggaacaagaactacaatgccagacagaccgcctcc tgtggacaaacacgacgacctacttcactga |
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Protein
| Protein ID | pfu_aug2.0_429.1_30747.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_429.1_30747.t1 MSGLKENKDISCYFITKHSWKGKYKRIFSVGTHGITTYNPQSLEVTNQWPYGEFVSIVPNVKAPNNNEFIITMKKGPKKT ESMKFSTDHRADLLTEALRFRNQFAEVNNTSKRFNAFKHHWSDNRVSVVLEVNQGSLDQIEASTNRKLCSYDYKDMEGLC QISDYPGGVAVIHGGFSRLHLFAIEQRDGFIKCVMEAAAAYVGVVVKQRREPITFEQFVNNRMGKYSTDEAMTSYAEFMV QKISPRHTDHVRRTLCLTESCLVERDPATYNAVTSKPLCDIFAIIRDQENPQKFSVEYVKGAVRTYLSTDRDALIASVLD GVRASGNRDVCIKMMVTSRGYRLGPFTVPVDEEVESQHLKFIHQPPVGMTFEECVSRFNSNISYSGLLHAVTQDGLFAEN KEKLINGALLSLLEKEGDQNVISAENLEGQFHALRRLVASKAGFEAFTKLPKMREKVGVKVVKSMKRKDTGVTHAALDVL CALMQPMHDDYDLRQEQLNKYSLLSSKKFLETLLDTFKDHVVHSTGALVISSMLDFLTFALCAPYSETTDGTQFDTLLEM VATNGRIVFKLFQHPSMAIVKGAGLVMKAIIEEGDAEVAAKMQDLALSEGALPKHLHTAMFTQSSDNRMLTIRQLSRHLV GLWVTGHPTAMGLLRRCLPPGLLSYMDSTDEVPIHETDKLHVRDNVKLAQDIQNRNRKNPNLVMIEKKIDEFLQHWRARI GLQKNKQQNELKPVTLRKRRQRIKSEANWQLFYYQFNRDHAKPNLIWNYKTREEVREALENEMRAFNVDRELGANCVVGW NHQEFEVPYHCLSDEIKIGDYYLRLLLEEGEDESEETSAIKKSYEFFNDLYHRFLLTPKIQMKCMCLQAMTIVYGKCHEE IGAFNDTRYIVGMLERCTDKLERDRLVLFLNKLILHPKNVKEIMDANGIKVLVDLLTLAHLHTSRATVPLQTNVIEASPD MSRDSEKEWYYGNKDKERLGPYSFDELKSMWKEETIHSKTRCWAQGMDGWRPLQGIPQLKWNLLATGQAVMNESDLASLI LNMLIRMTEYYPSRDVDGAIVRPLPRMKRMLSDPVCLPHIVQLLLTFDPILVEKVALVLFLVMQDNPNISRLYLTGVFFF ILMYTGSNVLPVARFLKYTHMSQAFRSDENKGSDIMTRSVLGHMLPEAMVCYLENYSADKFAQIFLGEFDTPEAIWNSEM RRLMIEKIASHLADFSPRLYSNTRAMYQYCPIPVIQFPQLENELFCNIYYLKHLCDTTKFPDWPIKDPVKLLKDILEAWK KEVEKKPPTMSIDQAYEVLNLKKGVGGHEESKIRKAYFKLAQKYHPDKNPDGREIFEQVNKAYEFLCSKSKLTEGPDPQN IVLILRAQSILFKRYKEELEPYKYAGYPMLIKTIKMETHDDALFSKSAPLLAAAAELAYHTVNCSALNAEELRREQGIQS LQEAFARCINVISITSKPEDTAVQVCLHIVKCYAVASQFEGCREKIQEIPAIIKDICRILFYKNLPQLCSVVAECISAFS VDFWLQTNLFQSGVLWHLLLYLFNYDYTLEEGGVEKSGESNQQEVCNNLARLCVRACARLGGYLPESSGLATPENVPVKK SVTAMLTPYLSRKLANESPSEGECDKEYGATFLFDIHAKELIVGEIFVRIYNEQSTFPLENAKGFTIDLLDYLGSQAQYL HSLMMLKKNDTSSQAKQGTRLLHVEMALEALRNVIKNNPGVEIQCIGHFKLLFCLLRLDDCAKLQQYALEVVNSVTTNQE CVNDIAASEVLGYLLLAINSLPNCQILTLESLFGLMSSTKIVKEALIKGAPVYLLDLFANASFPNVREKTAELMAKMLAD KLVGPKLRIILSKFLPGIFMDAMRDSPEASVHMFEGTHENPELIWNDESREKVSDTVKKLKDRHYLAQRDNADARWTLSE DFAVVYTDVEGELTIGGVFLRLFIANPGWVLRKPKEFLTELMEKWVQLINMQNPDGEVLETVTTGVVCLFSSQSAMLDQV PSLGYIPKVFHAMSHKNNAVTKSAIQVAHQLASNEICIRSMAQIDCIGPFKVGMKARRDQIALAAEALSKMFDKGEDELV AQAINTDLVPFLLKLLEGGLEALDKPAATKAQIVKALKAMQRSFQYGEQVTTILEKSPVWREYKDQKHDLFISDTPIAGY LTGPTGPSVAGYLTSGTRTTMPDRPPPVDKHDDLLH |
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