Gene
| Gene Model ID | pfu_aug2.0_408.1_27358 |
|---|---|
| Locus | scaffold408.1 : 183884 ... 186318 : + |
| To GenomeBrowser | scaffold408.1:183884..186318 |
| Genes list of scaffold | scaffold408.1 |
| Synonym | pfu_aug1.0_15399.1_32541 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_408.1_27358.t1 | 1 | 1 | TatD_DNase | 345 | 546 | 6.6e-28 | 97.5 | 6.6e-32 | 9.8e-28 | 97.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_408.1_27358.t1 | gi|66816519|ref|XP_642269.1| | hypothetical protein DDB_G0278649 [Dictyostelium discoideum AX4] | 2.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_408.1_27358.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_408.1_27358.t1 atgctttatgatttactgttttttcagacggatcaagattcaaagcagtttaagagcaacaatgcttcttcagctgaaat ctcatactgcccacttcggttttgtggatccatggacaaacgtctaagaagacatgtcatgactcgtcactttccaagtg taatgggagcaatggctgtcactcctatagatgtagagaatcagcttgaatgccttacatggctagtgaagactgtgttt gggcctacagcatcttatcaggatgcagtggattggataaacaagaataaagccattcctcaaggcgtgaatcttgatca gaatgtccatgatgagatctatgctattgcttgtgctattcttggagttgaagctgttgaatttttcactgtcaggccta ttaactctcctggggttttactattttggagatgtatattggcccttcttacacaatgtactgagaagcagtgtgagact ttcagatctttaaagccggataacatactagaattaatgtctagctttgatcagattcatgcatttcaactttgtgaaga gccagacttgattaaaactgaaccgtctgacagcaacagagctgagccaccatcagacaaccaagatctgcaaccagtct gcataaaaccagaaccagttgacaacaaccataatgaatcacctgacaacaaccaagctgaaccatctgatgaccatgac cttgatgacgaggagtttgtgattttagacgaagacatttcagatggaagtgaatcttctgtcagagattcctcagagag ttctcccgagagaccagaggcatttgacagtctgttccatttagatcagatgtgcttggcattgtggaagagttcctcag gttttactgtagaggatgtcataagttacagcaagtcctgcgagtcccttgatgtaccaagtttactggttaatgtagtt ggtggtgttattgtgtactctgaaccttcatcatacccagaaagcaacttcaaagtagaaggtccgtggaaggtggcgct aggagtgcaccctaaactctgtgataattttaacacggctcacagaatgaagcttgtacaacttatgaccaatcccaaaa tcgtagctctgggtgaatgtggacttgacagaacagttcccgtgtccaaatggtcaaagcaagaacaagtgtttagaagg ctgttgagccttgctaaagtagatcaacctcttatcttacaccttcatggtgtggaggcggatgaatatggttcagatgt ccattctttgtgtttaatcatgatggagcaactatgtcagcgtgagcagaaagtacacatccataacttcacaggaaagg agttcattgtaaaagcatggctcacaaaattcccaaatgtcttatttggacttacagcaaaggtaggacactttgatgcg gaacaaatagcgggactacgtgccattccacaagataaaatcttactggagacgggctcgccagacttttcaacaggaga aggatctatcaatactccatctaacatcggggaaactgctgtcattgtgtcaggccctctggaaatgcacccctatcaat tgctgaaattgactgttagaaatggacgtgcattgtacggcttataa |
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Protein
| Protein ID | pfu_aug2.0_408.1_27358.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_408.1_27358.t1 MLYDLLFFQTDQDSKQFKSNNASSAEISYCPLRFCGSMDKRLRRHVMTRHFPSVMGAMAVTPIDVENQLECLTWLVKTVF GPTASYQDAVDWINKNKAIPQGVNLDQNVHDEIYAIACAILGVEAVEFFTVRPINSPGVLLFWRCILALLTQCTEKQCET FRSLKPDNILELMSSFDQIHAFQLCEEPDLIKTEPSDSNRAEPPSDNQDLQPVCIKPEPVDNNHNESPDNNQAEPSDDHD LDDEEFVILDEDISDGSESSVRDSSESSPERPEAFDSLFHLDQMCLALWKSSSGFTVEDVISYSKSCESLDVPSLLVNVV GGVIVYSEPSSYPESNFKVEGPWKVALGVHPKLCDNFNTAHRMKLVQLMTNPKIVALGECGLDRTVPVSKWSKQEQVFRR LLSLAKVDQPLILHLHGVEADEYGSDVHSLCLIMMEQLCQREQKVHIHNFTGKEFIVKAWLTKFPNVLFGLTAKVGHFDA EQIAGLRAIPQDKILLETGSPDFSTGEGSINTPSNIGETAVIVSGPLEMHPYQLLKLTVRNGRALYGL |
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