Gene
Gene Model ID | pfu_aug2.0_4073.1_12581 |
---|---|
Locus | scaffold4073.1 : 43577 ... 44305 : - |
To GenomeBrowser | scaffold4073.1:43577..44305 |
Genes list of scaffold | scaffold4073.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_4073.1_12581.t1 | 2 | 1 | DUF4326 | 7 | 68 | 7.4e-14 | 52.0 | 1.0e-17 | 7.4e-14 | 52.0 |
pfu_aug2.0_4073.1_12581.t1 | 2 | 2 | DUF4326 | 102 | 130 | 7.4e-14 | 52.0 | 0.19 | 1400.0 | -0.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_4073.1_12581.t1 | gi|470511612|ref|XP_004351685.1| | hypothetical protein ACA1_398940 [Acanthamoeba castellanii str. Neff] | 2.0e-07 |
Transcript
Transcript ID | pfu_aug2.0_4073.1_12581.t1 |
---|---|
Definition | - |
>pfu_aug2.0_4073.1_12581.t1 atgggaagtattgtgggcaacaaatggagcaatccttatacctgtcaccctaggatgggagctaaagaattccagaaatg catgaggctatatgaacagcatatcagagacaacttatggaacaatttacacgaattgaaagggaagactctgggttgct ggtgctacccctatccgtgtcatgcagacattttaaaaaggctgtatgaggagatgatgtccaagaggttggaggaggac gagaaggctgctagctggttggaatggaagaaggttagtttttctgacgatgtacaagtcattgacgacgaggaaatgtc gcaagtattcgatgagaagatggatgaaagaacacaggaagacaagatggcggccgatagactcgtcgaaatcatggaag aagaggacaggaagaaggaagggaagaagagaatgtttggatcatcgttcggacaatataaaataaagaaggattacgga ggttgtgtatgcctagttaggaaaagaccatctgtcgctaagaaggaactatctatttctaaagagccgcccatggcctt aaaaactgattatgattttgatatgaatgaatttttacatcctaagaaaaagaagaaaataaagaaagattaa |
Protein
Protein ID | pfu_aug2.0_4073.1_12581.t1 |
---|---|
Definition | - |
>pfu_aug2.0_4073.1_12581.t1 MGSIVGNKWSNPYTCHPRMGAKEFQKCMRLYEQHIRDNLWNNLHELKGKTLGCWCYPYPCHADILKRLYEEMMSKRLEED EKAASWLEWKKVSFSDDVQVIDDEEMSQVFDEKMDERTQEDKMAADRLVEIMEEEDRKKEGKKRMFGSSFGQYKIKKDYG GCVCLVRKRPSVAKKELSISKEPPMALKTDYDFDMNEFLHPKKKKKIKKD |