Gene
| Gene Model ID | pfu_aug2.0_4073.1_12577 |
|---|---|
| Locus | scaffold4073.1 : 19751 ... 31355 : - |
| To GenomeBrowser | scaffold4073.1:19751..31355 |
| Genes list of scaffold | scaffold4073.1 |
| Synonym | pfu_aug1.0_11663.1_10346 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4073.1_12577.t1 | 2 | 1 | DNA_pol_B_2 | 406 | 587 | 1.9e-38 | 132.3 | 1.5e-22 | 2.2e-18 | 66.1 |
| pfu_aug2.0_4073.1_12577.t1 | 2 | 2 | DNA_pol_B_2 | 733 | 991 | 1.9e-38 | 132.3 | 4.7e-24 | 6.9e-20 | 71.1 |
Transcript
| Transcript ID | pfu_aug2.0_4073.1_12577.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4073.1_12577.t1 atgcagaaattattaaaagaaatgtttgatgatctactagcggatataaaagagatgggaggaatagaggaagacgataa gatggggatggaaatcgatcatccggcattaacggaaaaattaggttccatccactacccgtttaccctggccaaaaatt acgattcggaattgattttaggagagatcgaaaggattcaacagagtaatttaaaattcgtcctgaccgacggaaaaacg caaataagagtgagttcctttaaatgtcccaaaggaagtggaacactcaaacctttcgattcaccttatctcttttctcc taaatctaattgtttcttccaatctttggcctacggattaggatatacggccactaaaaaaagggggaacgaattaaaac aagaatttcgatgtacagacatcgtggccattcacaaattaaaagatctagctgcagaaatatccgataaatacgggata ttactcaaaatttacgtagaggagggaagacgatgcatcattaatgcattaagatatcaccctaaaatcgtacgtatttt attcatggaagaccattatttcctaataaaaaagattcataaattatacggtcaaaaattcaccaattactgcgaatatt gcgaagttccctacgtccgaaaacgagaccattttttgaaatgttataacaggtgtaaaaaatgcggaactttaagaaaa aactgtatgtacggcgaaaaaaagacgattaaatgcgttcactgtaaaacgacattttatacgacggaatgttattcatc gcatcattcgtatcattgtgtgcattttagtacgtgtgaaaaatgcggtctttatggcagaaccgatcacatcctaaatt ttcattattgtcttagaataagctgtccaaaatgtaaaaaaagtattctgagaggcgaggatcatgaatgtttcatggcg gttataaaaaaagattcggaaaaaaaccaacatcaattcaggtacgtctttgccgactttgaatcgcgacaagacgaggg aattcatacagtaaatttcatcgttagtcaaagagtgtgttccgtgtgtatgagcgatgaagacatgaatttaccctgta cgaactgttctaactggaaggaagaacgtatatttaaaggagatgattccttaaacactttcttgacttatctattttca caacggacggcttgtacggtcatcatgcataattttaagggatatgacggacaattcattcttagacatatcttagtcta tatcggaaccgttccttggaagataattactcagggtcagaaaataattcacatggaacacgaatgcaaaaggtttgtag attcgataaatttcattcctctagccttaaaaaatttcggtaagagtttcggattgaggcaggaaaagggttactttcct cacttatttaatagaaaagacacccaatcttacgtcggaatcatccctccgatgtataatttctgtccggaaagtatgaa cagtacggatctcacaaaatttcatgaatggtataaacaagaaatgaataaagaatatgatttcgaaagagaaatgcaaa aatattgtaagaatgacgtcgacgtcatgcgtttaggatgtgctaaattcagatcgatcatcatgcaaatgggtaaaata gatccttttgtcgactgtattaccgttgctagtgttgctaataagattttccggaaaaattatctgaaagaaaatgaggt tgcatgcattccggatgcggggtacgaaaaaaagaaaagactgtattccatcaaagcactgacgtggttacactcgttac ccggttcggataaaatacaaaaagcggattctctctacggtgaggtcaggttgaaattcgacgacggtacttcttattac gtcgacggaatggattcggacacggtttacgaattttacggttgttattggcacggttgttggcattgttatggagaaac cgaaaaggtaggaaggaacggtcttaaaatgagagaattgtatcaaaggacgatgcaaagggaaaataagatcaagttga aatacaaagtgaaacacatttgggaacacgaattcgatttaatgatgaaaaaaaacgaatcgttaaaagaattttatcaa tacatgaagagaaattgcgttttacctattaatccgagagacgcactttttggaggtagatgcgaagcctttaaattatg tgtcaaagatgagcccatgtcttacatagatgtatgttctctgtatccatacgtcttagccaatagggaatttcctttag gacatccggaaattcttaaaagacctaccggtgatgttaaatcgtatttcggattgataaaatgtaaaatattaccgccc aaagatctttacattccgatattaccggccaagattaacggtaaattaatatttaccttatgtcagacctgtgccgaaag gaaaaataataattgtacgcattcggaagaggaacgctgtttaatcggtacctggtgcagtcctgaaataaataaagcgc gtgaaaaggggtatatcattcgggaattatacgaagtttggcactggaaagacgtatccaaagatatctttagaggatat atcatgacatttttaaagaaaaagatggaaagtagcgatctaggtagcgatgttccaaaggcaatacaagacataatgga aaatgatggaatcaggataaatcccgaagatgtacgatataatcccggaatgaggacggttatgaaaatcatcctaaacg ttttatggggaaaaatggcacaaagaatccagttaagtaagcgaaaatactttagggataatacgaatttctttaattat ctttacgacgatactataaatatacagggtttattcataatatcggatgagataatcgtatctaattacacggataaaga ggaatttctttcggataatgcttttggaaacgtagtaataggatcatttactacctgttgggccagattaaaactgtacg agacgttagaaaaattagatcaaagagtggtatattgcgatacagattcggtcgtttatatccagagaggaggagaaatg atagcgactaaatcgggtttaggtgcatgggaaagcgaattagaagtagacgaacgaattatgcatttcgtatcgaccgg tcctaaaaattatgcatacaaaacgaataaaaataacgaggtctgtaaagttaagggatttacattagactttcaagctt cgcaagcgataaaatttgactcgatgagggattgtatcaagaatcaacaaaaattcatatcggtcgagtataaacagaag ataaaaaggacgaaagggcacgtgattgtgacacaacccctaactaagaaatataccatgattttcgataaaagaattcc tatttttggacaggaagtagacgatagttttccgtacggatttaggtataaaaaagacgacatactaagatctttgccat tcatcatggataagaaatcggagatggacgtaatttccaacctaatcgagaacgtaattaaaggatgtaaagaattagac gacatggaaatggtacgatcgaaattgaacagttattgtaaaagactcagtaaaatgaaacagaaaataattagaaaaca gaaacggaagtgtgaaaaaacggacatgataccccagatgtggatattccataaagactgtgatcatcaaggacagatgg atagaacttgtaccaagtgcaatatattcaataccgaatttaatgccgaaatgagtaatcagacagaggatgaagacgta ggtacgccttcagatgaagacgtagagatggaagatatagagtgcatagaaatcgaaaatcattttcgatgcgattgttg tggaaatatgtcaactaaagggtataccttaaatgtagatgaagagggaaatatagatgaagatgaggaagaaaacgcat tagtaagacgtttgcaacgaggtcaagggggttggggtctggctgccggtatggctgctaaggcagcacttagagtagca actagagcagcagctagaggagctgctcgactcgccaaaagggcggcggctaaaatggctaaaaaagcagctaaaaaagc tgcaggacgagcggcgagattagcaagnatggaagatatagagtgcatagaaatcgaaaatcattttcgatgcgattgtt gtggaaatatgtcaactaaagggtataccttaaatgtagatgaagagggaaatatagatgaagatgaggaagaaaacgca ttagtaagacgtttgcaacgaggtcaagggggttggggtctggctgccggtatggctgctaaggcagcacttagagtagc aactagagcagcagctaggggagctgctcgacttgccaaaagggcggcggctaaaatggctaaaaaagcagctaaaaaag ctgcaggacgagcggcgagattagcaagaagaactataggaaggacggccaggaaaatggctaaaaagagtataagaaga gtaactagaataactaccaaatctggaagaaaaggattgaaaaaaattataaagagaactgcaagaaaaactattggaag aacaaaacgaaatataaatagagggttaaaaaaagtcataaaaaatagaaaaatgagacaacaggtaaaagaaataggaa aaataatcggtagtcaggttaaaaaagctggtgtagaattacttaaacaacaattaaaatctgtaaccggaaccggacaa ggatcaacagatcaaccatctatatctctaaatagacaaagtgttgtattaccattagaagatgttaataccgttttaca aaaaaatcaacaagaacttcaaaaaataccatttcaaaacataacccaacgacctaaagaaaccataaatcaagtaaaaa aaatcgggaaaaaaacagttaccgaaattggtgaattaggtaaacaaaaggcaaaacaatttaaagatgcctttaaacaa aatgcaaccactgccttgaaaaatattggaacatcaacattacaagaattacaacaaggggtagggaaaatgatagcaaa acaaatggggcaaggacttctccgtgataaatatagatcaactccttttttgaaaagatactctgccttgagaaaaatca tagaatcggatcatttttccagaaggtcaagtcctatgactctaaaccgtatacaaaaaggcggcaatataccattacct tttttcctaccgtccagtagagcagttagtatcaaacgtacactttcaccatttctacaactagctaaattaaaaatagc tgagagagaaagcgaaggaaaaaaagttttcgacatgagtgatcaggcaaaggatgaagacgtaggtgcttcagatgaag acgtagagatggaagatatggagtgcgtagaaatcgaaaatgattttcgatgcgattgttgtggaagtatgtctactaca gggtatacattgaatgtagatgaatacggaactatagatgaagacggggaatacgacgtatggttatgcaaaaattgttt tttacatcttagttatgacgatatttctgaggagcaaaattacgaggacgaaaatacgtacgatactaaatgtttatgcg attgttgtagaaaagtagctcgtttgggcagtaacgcatgggacgtatggtacaccacaagaaagcaaaacggcgagata gaaaaaattttcttaaaccggtacagtctcctagactgtaaccatctacacatcttcgggtataagaccctaaaagattg ggtagaggacgaggacaatgtatacatcggcagtggcagtatatgggagaatccttattcggcagacgaatttggttttt tctggagcgatagcctgtacgaggaatacataagattcaacccgaccaagttgaagaacgggaagacactgtgggaaaat ttagacgatctatacccacagagaatggcgtgcgattgcaaatacgtttccgtcggtcattgtcacggacacgtgctcaa gaaattactctttcaaaagacctgtatttacggaacgagactaaacgatagtcaatgggaatcgctctacgaaataattc ttaccggacaccaccattacgagatcaacgatccggtctataacgaatgtccaagaaaggagatatttggaaaggagaca ctgaccggatgtatcgtaagagagtctataaaaaggaggatcatacagatcttagaagacagatacggactcctgggaca attcgcccgaggagaaagatttcagaaagaggggtactatcctgtcgagagcgttaaatggcggttttttgaaactaacc taaaactcccgagagaattcgacgtagattggaggtcaaataccgaagtcatagtagaaaacccgatgacgacaatgatc gtcgacatgcacctctgtcgagatgtatacatcaatgtattcatcaatggacacagcatcgggttcttagaggaggggga gtgtcccatagtggctcagacgagattgatagaatgcagatgcgagggatggcgaagagggttactcaataaaggaatat gttgtcggatacccaaggttccttattgttcgtttcaagtcaaagacggaggagaatacaagatcatacccggaaattat cgcatgtacggaccttgggggtgctggttaatccccaagagtatgtatgaagaccccctaatagacgagcaactggaggt cttgttgatcaagatcatgaaaaagggaacgggaaaatgggacggcatcagcaggttttacagttcttccaacgtaacga cgacaggaccatttctaaatggcatattaaaccttcttagatactattacggggtgtttaccttccccgaatttatcaat tttttcacagacttgagtagaggcggtattgatggtgttacatgtcaaataaaataa |
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Protein
| Protein ID | pfu_aug2.0_4073.1_12577.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4073.1_12577.t1 MQKLLKEMFDDLLADIKEMGGIEEDDKMGMEIDHPALTEKLGSIHYPFTLAKNYDSELILGEIERIQQSNLKFVLTDGKT QIRVSSFKCPKGSGTLKPFDSPYLFSPKSNCFFQSLAYGLGYTATKKRGNELKQEFRCTDIVAIHKLKDLAAEISDKYGI LLKIYVEEGRRCIINALRYHPKIVRILFMEDHYFLIKKIHKLYGQKFTNYCEYCEVPYVRKRDHFLKCYNRCKKCGTLRK NCMYGEKKTIKCVHCKTTFYTTECYSSHHSYHCVHFSTCEKCGLYGRTDHILNFHYCLRISCPKCKKSILRGEDHECFMA VIKKDSEKNQHQFRYVFADFESRQDEGIHTVNFIVSQRVCSVCMSDEDMNLPCTNCSNWKEERIFKGDDSLNTFLTYLFS QRTACTVIMHNFKGYDGQFILRHILVYIGTVPWKIITQGQKIIHMEHECKRFVDSINFIPLALKNFGKSFGLRQEKGYFP HLFNRKDTQSYVGIIPPMYNFCPESMNSTDLTKFHEWYKQEMNKEYDFEREMQKYCKNDVDVMRLGCAKFRSIIMQMGKI DPFVDCITVASVANKIFRKNYLKENEVACIPDAGYEKKKRLYSIKALTWLHSLPGSDKIQKADSLYGEVRLKFDDGTSYY VDGMDSDTVYEFYGCYWHGCWHCYGETEKVGRNGLKMRELYQRTMQRENKIKLKYKVKHIWEHEFDLMMKKNESLKEFYQ YMKRNCVLPINPRDALFGGRCEAFKLCVKDEPMSYIDVCSLYPYVLANREFPLGHPEILKRPTGDVKSYFGLIKCKILPP KDLYIPILPAKINGKLIFTLCQTCAERKNNNCTHSEEERCLIGTWCSPEINKAREKGYIIRELYEVWHWKDVSKDIFRGY IMTFLKKKMESSDLGSDVPKAIQDIMENDGIRINPEDVRYNPGMRTVMKIILNVLWGKMAQRIQLSKRKYFRDNTNFFNY LYDDTINIQGLFIISDEIIVSNYTDKEEFLSDNAFGNVVIGSFTTCWARLKLYETLEKLDQRVVYCDTDSVVYIQRGGEM IATKSGLGAWESELEVDERIMHFVSTGPKNYAYKTNKNNEVCKVKGFTLDFQASQAIKFDSMRDCIKNQQKFISVEYKQK IKRTKGHVIVTQPLTKKYTMIFDKRIPIFGQEVDDSFPYGFRYKKDDILRSLPFIMDKKSEMDVISNLIENVIKGCKELD DMEMVRSKLNSYCKRLSKMKQKIIRKQKRKCEKTDMIPQMWIFHKDCDHQGQMDRTCTKCNIFNTEFNAEMSNQTEDEDV GTPSDEDVEMEDIECIEIENHFRCDCCGNMSTKGYTLNVDEEGNIDEDEEENALVRRLQRGQGGWGLAAGMAAKAALRVA TRAAARGAARLAKRAAAKMAKKAAKKAAGRAARLAXMEDIECIEIENHFRCDCCGNMSTKGYTLNVDEEGNIDEDEEENA LVRRLQRGQGGWGLAAGMAAKAALRVATRAAARGAARLAKRAAAKMAKKAAKKAAGRAARLARRTIGRTARKMAKKSIRR VTRITTKSGRKGLKKIIKRTARKTIGRTKRNINRGLKKVIKNRKMRQQVKEIGKIIGSQVKKAGVELLKQQLKSVTGTGQ GSTDQPSISLNRQSVVLPLEDVNTVLQKNQQELQKIPFQNITQRPKETINQVKKIGKKTVTEIGELGKQKAKQFKDAFKQ NATTALKNIGTSTLQELQQGVGKMIAKQMGQGLLRDKYRSTPFLKRYSALRKIIESDHFSRRSSPMTLNRIQKGGNIPLP FFLPSSRAVSIKRTLSPFLQLAKLKIAERESEGKKVFDMSDQAKDEDVGASDEDVEMEDMECVEIENDFRCDCCGSMSTT GYTLNVDEYGTIDEDGEYDVWLCKNCFLHLSYDDISEEQNYEDENTYDTKCLCDCCRKVARLGSNAWDVWYTTRKQNGEI EKIFLNRYSLLDCNHLHIFGYKTLKDWVEDEDNVYIGSGSIWENPYSADEFGFFWSDSLYEEYIRFNPTKLKNGKTLWEN LDDLYPQRMACDCKYVSVGHCHGHVLKKLLFQKTCIYGTRLNDSQWESLYEIILTGHHHYEINDPVYNECPRKEIFGKET LTGCIVRESIKRRIIQILEDRYGLLGQFARGERFQKEGYYPVESVKWRFFETNLKLPREFDVDWRSNTEVIVENPMTTMI VDMHLCRDVYINVFINGHSIGFLEEGECPIVAQTRLIECRCEGWRRGLLNKGICCRIPKVPYCSFQVKDGGEYKIIPGNY RMYGPWGCWLIPKSMYEDPLIDEQLEVLLIKIMKKGTGKWDGISRFYSSSNVTTTGPFLNGILNLLRYYYGVFTFPEFIN FFTDLSRGGIDGVTCQIK |
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