Gene
| Gene Model ID | pfu_aug2.0_397.1_23967 |
|---|---|
| Locus | scaffold397.1 : 27526 ... 53426 : + |
| To GenomeBrowser | scaffold397.1:27526..53426 |
| Genes list of scaffold | scaffold397.1 |
| Synonym | pfu_aug1.0_2607.1_30173 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_397.1_23967.t1 | 5 | 1 | 2-Hacid_dh_C | 6 | 34 | 0.0 | 414.9 | 6.1e-10 | 1.3e-06 | 27.6 |
| pfu_aug2.0_397.1_23967.t1 | 5 | 2 | 2-Hacid_dh_C | 208 | 250 | 0.0 | 414.9 | 7.5e-08 | 0.00016 | 20.8 |
| pfu_aug2.0_397.1_23967.t1 | 4 | 1 | NAD_binding_2 | 208 | 244 | 1.6e-11 | 44.3 | 0.063 | 130.0 | 2.3 |
| pfu_aug2.0_397.1_23967.t1 | 5 | 3 | 2-Hacid_dh_C | 259 | 389 | 0.0 | 414.9 | 6.3e-36 | 1.3e-32 | 112.3 |
| pfu_aug2.0_397.1_23967.t1 | 4 | 2 | NAD_binding_2 | 290 | 355 | 1.6e-11 | 44.3 | 0.0012 | 2.5 | 7.9 |
| pfu_aug2.0_397.1_23967.t1 | 5 | 4 | 2-Hacid_dh_C | 446 | 544 | 0.0 | 414.9 | 4.2e-30 | 8.8e-27 | 93.3 |
| pfu_aug2.0_397.1_23967.t1 | 4 | 3 | NAD_binding_2 | 454 | 512 | 1.6e-11 | 44.3 | 0.017 | 35.0 | 4.1 |
| pfu_aug2.0_397.1_23967.t1 | 5 | 5 | 2-Hacid_dh_C | 577 | 759 | 0.0 | 414.9 | 0.0 | 2.8026e-45 | 153.6 |
| pfu_aug2.0_397.1_23967.t1 | 4 | 4 | NAD_binding_2 | 616 | 724 | 1.6e-11 | 44.3 | 1.0e-08 | 2.1e-05 | 24.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_397.1_23967.t1 | gi|198430441|ref|XP_002130283.1| | PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_397.1_23967.t1 | gi|524867191|ref|XP_005090408.1| | PREDICTED: hydroxyphenylpyruvate reductase-like [Aplysia californica] | 4.2039e-45 |
Transcript
| Transcript ID | pfu_aug2.0_397.1_23967.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23967.t1 atggataagcggcacctacttgatgttgtagaaaatgagccattagctccagatgatcctttatggaataaacctaatgt aactataactccacatatttcaggaaaccctggaaatgtaaaaacggcgggtagtttttatgtaggatttgatgaacaat tctgtatttgcatattaccaatggatccatcaaactgtaaagtatatgtatacacagaactgaatggactttctgctgct gtaaaagatagattgcctgatgtcaacctgagatgtttcaaagaacattccggttctaattttccatttggattaggaca atttttccacatatctggtgaggaccttgaggagatccgacagaatgctgatgttctactctcatcacctcccataatcg ttaaagtcctccaaggggaaaataaattaaaatgggcacaatcttacagtgctggggtagattggattggaagagatcaa tatgctcgcacgaagagaataccgattacgaaaatgggtgaaggttggaacgagtcgatggcagaatatgtacttggctt tataatgaataaggaaaggcgcattcaagaaatgatacgggatcagattgaaagggaatgggataggcaaattgatgaaa tattggaatttctagaagaaagtgattatataatatgtgtcctgccgggaacacctgaaacgaaagacatgctgtctgga gaagttctcagatcatgcaaaaataagcttatatcatatctattttacattgcaacagttgcgaaagttctcaaggtctt tggtatgacggttaatggattaagtcagcgtcccaaagagatcagttctgattcgcccttcagaagtataaggcaaattg atgaaatattggaatttctagaagaaagtgattatataatatgtgtcctgccgggaacacctgaaacgaaagacatgctg tctggagaagttctcaaaccatgcagaaataagaaaccatacttaataaatattggtcgtggtgatttgataaacgcaag tactatagaaaaagctatcagagaggggtggatcagtggagcactattagatgttgtggagccagagccgttaccgcctg accatccattgtggagcatacctaatgttaccataacacctcattgctctggtgtgccaaatgttatacaggatctcaag aatgtacaggtgacgaaaatgggtgaaggcagggaagaggctatgtcacagtacgtgcttggcttcatcattagcagaga gagacatttcctagaaattattcaggctcatcaagataaagaatggataaaatgtttgcaaaagaacggattatcatact tgctacaggagtgtgattatttaatcaatgtacttccgggaacatcggaaactaaagacctgctgtctggagatgctctc aaatcatgcaaaaataagaaaccttacttcataaacattggtagagcagatgtaatcgacataaatagcctagagaaggc catcagggaaaagtggataagcggagcgttattagacgttgtagaatcagaaccgttatcgcctgatgatcctttgtgga gtatacctaatgttaccataacacctcattgttctgctgtaccaaataatatcgataagttcctcgaaaatgtacagcta acaaagatgggtgaaggaagggaggaggctatgtcacaatacgtgctgggctttatcatcagcagggaaaggcgttttcc agaattggtaaagggtcataatgataaagaatgggagaaatgtaggcaaaacattcttcagaacatacgcccactatcgt ctttgactgtggggattcttggtatgggacgaataggaaaacaaatcgcaaacagtctcgatccatttggaatgaatatt aatggaatgtgtcgtcatccaaaagaaagcaataatgactttcctttcaagaagatctggcaaaagaatggattatcggc cctactagaggagtgtgactatatcgtcaatgtcctgccaggaacatcggaaacaaaaagcatgctgtctggagaaactc tcaaatcatgcaaaaataagaaaccttacttcatcaacattggtagagcagacatcatcgacacagaaagtttagagaaa gcaatcagtgaggggtggataagtggagcattattagatgttgtggagtcagaaccattaccacctgaccatcctttgtg gaggatacctaatgttaccataactcctcatatctctggtgttccaaataaccgcaatcagatgatagacttattcgcaa gaaacttggaaaagtttttgaataatgaacccttgctgtatacatttgattgtaaaagtggatactag |
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Protein
| Protein ID | pfu_aug2.0_397.1_23967.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23967.t1 MDKRHLLDVVENEPLAPDDPLWNKPNVTITPHISGNPGNVKTAGSFYVGFDEQFCICILPMDPSNCKVYVYTELNGLSAA VKDRLPDVNLRCFKEHSGSNFPFGLGQFFHISGEDLEEIRQNADVLLSSPPIIVKVLQGENKLKWAQSYSAGVDWIGRDQ YARTKRIPITKMGEGWNESMAEYVLGFIMNKERRIQEMIRDQIEREWDRQIDEILEFLEESDYIICVLPGTPETKDMLSG EVLRSCKNKLISYLFYIATVAKVLKVFGMTVNGLSQRPKEISSDSPFRSIRQIDEILEFLEESDYIICVLPGTPETKDML SGEVLKPCRNKKPYLINIGRGDLINASTIEKAIREGWISGALLDVVEPEPLPPDHPLWSIPNVTITPHCSGVPNVIQDLK NVQVTKMGEGREEAMSQYVLGFIISRERHFLEIIQAHQDKEWIKCLQKNGLSYLLQECDYLINVLPGTSETKDLLSGDAL KSCKNKKPYFINIGRADVIDINSLEKAIREKWISGALLDVVESEPLSPDDPLWSIPNVTITPHCSAVPNNIDKFLENVQL TKMGEGREEAMSQYVLGFIISRERRFPELVKGHNDKEWEKCRQNILQNIRPLSSLTVGILGMGRIGKQIANSLDPFGMNI NGMCRHPKESNNDFPFKKIWQKNGLSALLEECDYIVNVLPGTSETKSMLSGETLKSCKNKKPYFINIGRADIIDTESLEK AISEGWISGALLDVVESEPLPPDHPLWRIPNVTITPHISGVPNNRNQMIDLFARNLEKFLNNEPLLYTFDCKSGY |
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