Gene
| Gene Model ID | pfu_aug2.0_397.1_23966 |
|---|---|
| Locus | scaffold397.1 : 22920 ... 26375 : - |
| To GenomeBrowser | scaffold397.1:22920..26375 |
| Genes list of scaffold | scaffold397.1 |
| Synonym | pfu_aug1.0_2607.1_30174 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_397.1_23966.t1 | 2 | 1 | zf-B_box | 13 | 56 | 1.4e-14 | 53.7 | 2.9e-09 | 4.0e-06 | 26.6 |
| pfu_aug2.0_397.1_23966.t1 | 2 | 2 | zf-B_box | 69 | 105 | 1.4e-14 | 53.7 | 3.7e-11 | 4.9e-08 | 32.7 |
| pfu_aug2.0_397.1_23966.t1 | 5 | 1 | NHL | 332 | 346 | 2.2e-07 | 30.4 | 0.013 | 17.0 | 5.5 |
| pfu_aug2.0_397.1_23966.t1 | 5 | 2 | NHL | 375 | 389 | 2.2e-07 | 30.4 | 2.4 | 3200.0 | -1.6 |
| pfu_aug2.0_397.1_23966.t1 | 5 | 3 | NHL | 425 | 440 | 2.2e-07 | 30.4 | 0.0033 | 4.5 | 7.4 |
| pfu_aug2.0_397.1_23966.t1 | 5 | 4 | NHL | 460 | 484 | 2.2e-07 | 30.4 | 0.00022 | 0.29 | 11.1 |
| pfu_aug2.0_397.1_23966.t1 | 5 | 5 | NHL | 507 | 518 | 2.2e-07 | 30.4 | 0.014 | 18.0 | 5.4 |
Transcript
| Transcript ID | pfu_aug2.0_397.1_23966.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23966.t1 atggcgtcgtcagtcaacctttccaatgcgcagagagctgttccatgcaacgtgtgcgaggacgaggtacctggtgaata cttttgtatagaatgtaaacagacattgtgtcctcaatgcgagaaaactcacaaaagactcgctggtaccagaaaccaca ctatagtactgagaacccaggtagatgatctagatactaagaccttgacctgtactgatcatggagacctagcttccttt cactgtgagaaatgtaacaaaccagtctgtatcaaatgtgtcactggaaaacacaaaggtcatgaaatggtcgacctcaa tgagagattagaaaaggaaaagaagctactactccaagaagaaatcaacaaaattaaaagggacttcttgccaatattaa agaaaaagagggaaaatatcagaatacaaacgcaaaggtatcaggcgaaaattcaacagatcagggaagacatggaaggc gaacatcgtgcacgccaagctgacctgacaagaatcaaaaacaaaagattgaaaaacctagcttccattcgagaggaagg tttggctaaatttgaaaattattcacaaaaaattaacaaagaaatcaatttcttcgtaaagagaatatcagagaatgagg acgcaattgaaacaggcgatattaccacagagatgctttcaagaacaaggatacctcttcctgaaatagggaataccata caactaccagatcctcctatatttctacctggagacgcaacttcaattggcggaattcttggaaaactacatgtaaaacc tcctcctttggtatcagagccattgaaaccaacattgctcaccatggtattaatgttcacatgcccattacaaggatcac tatctatatgtactaccaaggaaggtgacgtatggcttggtggatacggatccagagagctgttaatggtggatatcaaa ggccaggtaaccaggagggagaagatacagagcagacctgcagcgctggctgtgatggaatgtggcgacatcatcgtaag tcccaactgtgaagattccaaatcagtcagcagactaacgaaaaatggcaaagaaaaacacatatacgatgcatcaccgt cctattgtaatggagtatctgtcacagttgatcagaagatactgatttgtactggggatggaagagtagttaagatcgat ggtgacggtactaacgtcaaacagatctacaaaggctctggtagcgactcagccgtacatgctgttgagaacgctaatgg taacatctacatcagtgactttgcacactctgctgtggtgagggtcactagttatggtaaagtccagtcaatagcacaca cagcagaaggacaaaagttaggaaggccatggggattagtggttgataagatggacaacatcttatgtgcagacatagac agacactgtgtatatatcatagatcagcagattagggagatggctggatgcttcgataggattcaagagccagggtggtt agccgtggacaatgacaacaatctgtggatagcccagggtaatgaggatgtacaggttgccaagtatttgtctccatga |
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Protein
| Protein ID | pfu_aug2.0_397.1_23966.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_397.1_23966.t1 MASSVNLSNAQRAVPCNVCEDEVPGEYFCIECKQTLCPQCEKTHKRLAGTRNHTIVLRTQVDDLDTKTLTCTDHGDLASF HCEKCNKPVCIKCVTGKHKGHEMVDLNERLEKEKKLLLQEEINKIKRDFLPILKKKRENIRIQTQRYQAKIQQIREDMEG EHRARQADLTRIKNKRLKNLASIREEGLAKFENYSQKINKEINFFVKRISENEDAIETGDITTEMLSRTRIPLPEIGNTI QLPDPPIFLPGDATSIGGILGKLHVKPPPLVSEPLKPTLLTMVLMFTCPLQGSLSICTTKEGDVWLGGYGSRELLMVDIK GQVTRREKIQSRPAALAVMECGDIIVSPNCEDSKSVSRLTKNGKEKHIYDASPSYCNGVSVTVDQKILICTGDGRVVKID GDGTNVKQIYKGSGSDSAVHAVENANGNIYISDFAHSAVVRVTSYGKVQSIAHTAEGQKLGRPWGLVVDKMDNILCADID RHCVYIIDQQIREMAGCFDRIQEPGWLAVDNDNNLWIAQGNEDVQVAKYLSP |
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