Gene
| Gene Model ID | pfu_aug2.0_390.1_00686 |
|---|---|
| Locus | scaffold390.1 : 206039 ... 249662 : - |
| To GenomeBrowser | scaffold390.1:206039..249662 |
| Genes list of scaffold | scaffold390.1 |
| Synonym | pfu_aug1.0_1692.1_37088 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_390.1_00686.t1 | 5 | 1 | DC_STAMP | 282 | 350 | 0.0 | 170.6 | 0.18 | 530.0 | 0.0 |
| pfu_aug2.0_390.1_00686.t1 | 5 | 2 | DC_STAMP | 353 | 375 | 0.0 | 170.6 | 2.5e-05 | 0.073 | 12.6 |
| pfu_aug2.0_390.1_00686.t1 | 5 | 3 | DC_STAMP | 768 | 843 | 0.0 | 170.6 | 0.043 | 130.0 | 2.1 |
| pfu_aug2.0_390.1_00686.t1 | 5 | 4 | DC_STAMP | 846 | 1036 | 0.0 | 170.6 | 0.0 | 0.0 | 165.5 |
| pfu_aug2.0_390.1_00686.t1 | 5 | 5 | DC_STAMP | 1050 | 1094 | 0.0 | 170.6 | 0.45 | 1300.0 | -1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_390.1_00686.t1 | gi|676494281|ref|XP_009066511.1| | hypothetical protein LOTGIDRAFT_155733 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_390.1_00686.t1 | gi|676494284|ref|XP_009066512.1| | hypothetical protein LOTGIDRAFT_184492 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_390.1_00686.t1 | gi|390332384|ref|XP_795449.3| | PREDICTED: uncharacterized protein LOC590762 isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_390.1_00686.t1 | gi|632972308|ref|XP_007902593.1| | PREDICTED: DC-STAMP domain-containing protein 1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_390.1_00686.t1 | gi|641670910|ref|XP_008185393.1| | PREDICTED: DC-STAMP domain-containing protein 1 [Acyrthosiphon pisum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_390.1_00686.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_390.1_00686.t1 atgatctctctgccgacactgaccaccggaaaaggtcgtacagccatcttttccttcgtctttgccctgttgctgaccgg acctgtggccaacatatcattaaatttacacctgatttcaaaaaccatgtcatgcagtgctgatctagcaagaaatcaaa ctactgcactcaagaaaagtttgcaagaccctgtcaacaaaataaaggataaaatggacaacgtggcatctaccctatct agtgtaggcgatactctctctagagcgttcgcaccaatattccaaggactggccgcggtgtctaacggccttggtgcagc ttcagggggtctgaaggaagcttcatatgcatgcaataaaatgttcacagaagcttattccaagtgctataatggtataa acagtgcctattcaaagtgcaggaatgctctgaacaaagtccctgtaataggaaagcgtgatcttaccaaagtgaaagag aggatatcaggagatcagaagttcattgcagccctgaaaaaagtcaaggacaaatacttagagatgagagagaaattcgg ggagaaaaaagcccttgaaatgattgaaaccttggatatcgatcctggctatgatatgaatgggttaatgaaggacattc tgtcaaatttcacgtcccctcacgaccacaggtcaaaaagatcactgagtgacctatgtaacgtgctgaatatcggagca gtctgcaatgccctaagcattggacagggtatatgtaaaccagtggaatttgcggataatatcgtgtcttctgcagcaca gaaaacaaaccaagcttacaacacagtcaaagattggttcttggtcaaagtcaataagaaacaaggacttaaaggactcg taaatgcctcaaaaacggcagctcagattcagaagcagattcaagatcagcttaccgccgatacctcactcatcgtagac aatttagcgattgttgggaacttgctcgctattttactcttgttcctaatatttcagtctacaatgtatctaaggaatta tatttcaagagatgattatgataatatctacatcacaaagcagttcagagaatatgatgaggaatgcgagattaatggaa aggagaatagatatggcaatgtagagattgatctcgaaggatcaagtaccatacaactagagcctaatccaccatcaacc aacaagcggaaatttgaccatcatgccgtttttgagcataatctggaaaaagtacaaactgttgtacatcaactattcca taccgacaaggaagaaaatatgaacctcaaggctggatttggcgtggcagcaggaattttgggtggcggaattctttacc tgatgctatactttttctaccagattccggcactgatcagcctgtacatcacgctaccatgtactgctattctctgcctt ggcatgggtatatctacgggattccgttgtgttgtcatgatctctcttccgacactgtccaccggcaggggtcgtaccgc tatttattccttgatctttgccctgttgctgacgggacctgtggcaaacatatcggcaaatttacatctgatttctgcta caatgtcttgcagtgctgatttagcaaggaatcaaactgccgcactaaaacaacaattacaagatccaatcaacacaatt aagaacaagatggatactgtggcatcaaccctttcctctataggtgacacactctctacggctttctctcctatctatag tggtatagaggctgcagcggccggtctgagtgctgcagcagggcaactcaatgaagcatcatatgcatgtaaccaaatgt ttactggggcctacactgactgctataacggaataaacagtgcatatacagagtgtaagaataccctcgatgacatcccc gtcattggaaagcgagatctgacgagagtgaaagaacggataatgagacatcagaaattcatagcagccctggaaaaggt caaggcggagtacgttaaaatcagggggaaagtcgggaagaaaaaggctcgtgaaatgttggacagtttaaacgttgact ttgacattaaagacgttaacaacttgctgaaggacattttatcgaattttacggagcatcacaatcatagatctaaaaga ggcctgagtgatgtatgtaatgcccttgacgtctcatcaatttgtgatgtactcaaaactagtagtggaatatgtgatcc agtcgaagccgcagattcactggtctctgcagcggcaacaaaaaccaatgaagcgtatcaagccgtcaaagactggttca acatcaaagtatataaaaatctaggaattgaaggtctggttaatgcatccaaaacagcagcagagatccaacaacagatt tctgatcagttgacggcagatacggcactcgtcgtggacaacctggctataattggaaaccttcttgccctcttattgtt gtttctcatgatccaatctgcattgtacttgaggagttacatctcaagagatgagtatgacaacatctacatcacaaagc agtttcgggaatatgacgaggaatgtcgtagcatagggaaacggaccgttctcccgttgaagaaagccgagaagaagatg tatatagactgtagctcttgtctgttgacagcggtagaattcaagaccagttttgctggtttggctcaacttttcctcca catgattgtctgtgtgatactggttttcttcgactacgttttttactatgtggtatacttggtacagaggtatggtaata tagagatagacctcacaggatccagttctattgtactcactgtggaagggacgggagaaatcgccacgcttctacgtgct ttgatcagcgatatcaacatacaaaacacatacaatgcagatctgaacttcacaacctgtctaccaacggctcttgaacc agagacttctgaccttattctatatataaccctttacctgatctgtgtcggtacgattcttgtacaagcttacggtatga gaacaagacgcaggatttcagcctatttctacccccgtcaagaaacagaaagaatcatttacctgcacaagaaaatcatc tttaaacgccagggacggcaaaaattccagttcatgcacatgaagacgcgcaagaaggagcgtgacacgtcgcagtcttt ggcattgtcccgtaaagttgccaatagagtccctgccatgacctccatccttcgagtaaaccagcgagaatgcctaagct gtaaggacaaagaaaaagctgacagtgtgttttacacttgttctaatgtggattgttacgcagattactgtgaggaatgc taccaagatatgaacgaaaagtgtgtgctgtgtaacccacctacgtga |
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Protein
| Protein ID | pfu_aug2.0_390.1_00686.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_390.1_00686.t1 MISLPTLTTGKGRTAIFSFVFALLLTGPVANISLNLHLISKTMSCSADLARNQTTALKKSLQDPVNKIKDKMDNVASTLS SVGDTLSRAFAPIFQGLAAVSNGLGAASGGLKEASYACNKMFTEAYSKCYNGINSAYSKCRNALNKVPVIGKRDLTKVKE RISGDQKFIAALKKVKDKYLEMREKFGEKKALEMIETLDIDPGYDMNGLMKDILSNFTSPHDHRSKRSLSDLCNVLNIGA VCNALSIGQGICKPVEFADNIVSSAAQKTNQAYNTVKDWFLVKVNKKQGLKGLVNASKTAAQIQKQIQDQLTADTSLIVD NLAIVGNLLAILLLFLIFQSTMYLRNYISRDDYDNIYITKQFREYDEECEINGKENRYGNVEIDLEGSSTIQLEPNPPST NKRKFDHHAVFEHNLEKVQTVVHQLFHTDKEENMNLKAGFGVAAGILGGGILYLMLYFFYQIPALISLYITLPCTAILCL GMGISTGFRCVVMISLPTLSTGRGRTAIYSLIFALLLTGPVANISANLHLISATMSCSADLARNQTAALKQQLQDPINTI KNKMDTVASTLSSIGDTLSTAFSPIYSGIEAAAAGLSAAAGQLNEASYACNQMFTGAYTDCYNGINSAYTECKNTLDDIP VIGKRDLTRVKERIMRHQKFIAALEKVKAEYVKIRGKVGKKKAREMLDSLNVDFDIKDVNNLLKDILSNFTEHHNHRSKR GLSDVCNALDVSSICDVLKTSSGICDPVEAADSLVSAAATKTNEAYQAVKDWFNIKVYKNLGIEGLVNASKTAAEIQQQI SDQLTADTALVVDNLAIIGNLLALLLLFLMIQSALYLRSYISRDEYDNIYITKQFREYDEECRSIGKRTVLPLKKAEKKM YIDCSSCLLTAVEFKTSFAGLAQLFLHMIVCVILVFFDYVFYYVVYLVQRYGNIEIDLTGSSSIVLTVEGTGEIATLLRA LISDINIQNTYNADLNFTTCLPTALEPETSDLILYITLYLICVGTILVQAYGMRTRRRISAYFYPRQETERIIYLHKKII FKRQGRQKFQFMHMKTRKKERDTSQSLALSRKVANRVPAMTSILRVNQRECLSCKDKEKADSVFYTCSNVDCYADYCEEC YQDMNEKCVLCNPPT |
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