Gene
| Gene Model ID | pfu_aug2.0_388.1_27337 |
|---|---|
| Locus | scaffold388.1 : 277505 ... 294530 : + |
| To GenomeBrowser | scaffold388.1:277505..294530 |
| Genes list of scaffold | scaffold388.1 |
| Synonym | pfu_aug1.0_15170.1_39668 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_388.1_27337.t1 | 1 | 1 | Ig_2 | 37 | 110 | 7.3e-06 | 26.0 | 5.6e-09 | 1.7e-05 | 24.8 |
| pfu_aug2.0_388.1_27337.t1 | 1 | 1 | Peptidase_C14 | 127 | 311 | 5.5e-17 | 62.2 | 2.0e-19 | 5.9e-16 | 58.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_388.1_27337.t1 | gi|524875607|ref|XP_005094529.1| | PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_388.1_27337.t1 | gi|524875603|ref|XP_005094527.1| | PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_388.1_27337.t1 | gi|742205676|ref|XP_010894825.1| | PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like isoform X1 [Esox lucius] | 0.0 |
| pfu_aug2.0_388.1_27337.t1 | gi|742205687|ref|XP_010894828.1| | PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like isoform X2 [Esox lucius] | 0.0 |
| pfu_aug2.0_388.1_27337.t1 | gi|688597188|ref|XP_009291907.1| | PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X2 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_388.1_27337.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_388.1_27337.t1 atgacacaacgtcacaaggttttaacctttgatgtctgccatgatcctaatgtaaaaatcctcaattgttctgatgagat agagattatcagcaatcctaagacgtgtacagtggagtttggaggaaatgccgtgtttacatgcgaggccagatgtaggg gagagcagctcagatataaatggtttaaagacggagtagaactacctggtgagaccaagtgtgagctccgcctatataac ctacaggacatggacaaacagggagtttatcaatgttccgttatagctccgtcatctcaccgtcagcgactcacaaatcc tgccacattgtcaatcaaatataacccactaagaccaccagaatttaatcccacagacaaggttgccctgctcattggta actatgactacatacatgaatctaagctcaaagctccaaaggcagatgtattaactatgtcagaaatattccgtagttta gacttcaaagttgtttccttgttaaatcttacaaagaccgagatgttatcagccgtagatgaattctcagaactgttagg acgtgaagtttacggtgtgttttatttctgtgggcatgggttcgaggaggatgggcgatgctacttagtgccccctgatg cccgggcgggttatacgatagatgattgtgtttgtgctgagaaagtgctacagagaatgcagaaaccagatcctgcctta actgtgctaattctggacatctgtaggatcaggaatcgagtgcctagtccaaagcctgaaattctggattttactcagaa aggaaatacagttttctgttatgctacgagtgaaggaatgtatgcatatgaaaactcagagaatggaattctggtccagt atttacagagatttcttcttcaacacaaaggtctggtggaaatattctcccaactacaagaagacattggtaaagagcca aaacattacaagctacagattccagaggtcaggtcaaacctgctggagcctcgaagatcactggccgacagaatatcgtt taaaggcaacaccgtaatgtacaacaagaggactctgaaatggctcagggctcatcaaaagccagagaagcaactaatag agattcctgatctgctaatgttgatagagctagagttccagtctgagttttctaatgtccttcatgttattacaacagtg aagaggaatggagtaacagctaaagccataggttatataggacacctgccttctagtgtgtctacgctagatgagcaacc aaagataatatccactaaccctatgaggaccaagacgaccctgtatgacatgcagaaattgacggatgacctttggatct cagttcagatcagatacaacaaggttctggataacggacagctcagtccagatttgtgccatgataagaccagagttaac ttgaaactccccctggtggcagttttaatgctctggaagcttcggggaagtgaggcaatggaacatgaggagaatgatta taaatatacaggattatcgtctgcgtcatccatgacaaacagcatgtag |
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Protein
| Protein ID | pfu_aug2.0_388.1_27337.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_388.1_27337.t1 MTQRHKVLTFDVCHDPNVKILNCSDEIEIISNPKTCTVEFGGNAVFTCEARCRGEQLRYKWFKDGVELPGETKCELRLYN LQDMDKQGVYQCSVIAPSSHRQRLTNPATLSIKYNPLRPPEFNPTDKVALLIGNYDYIHESKLKAPKADVLTMSEIFRSL DFKVVSLLNLTKTEMLSAVDEFSELLGREVYGVFYFCGHGFEEDGRCYLVPPDARAGYTIDDCVCAEKVLQRMQKPDPAL TVLILDICRIRNRVPSPKPEILDFTQKGNTVFCYATSEGMYAYENSENGILVQYLQRFLLQHKGLVEIFSQLQEDIGKEP KHYKLQIPEVRSNLLEPRRSLADRISFKGNTVMYNKRTLKWLRAHQKPEKQLIEIPDLLMLIELEFQSEFSNVLHVITTV KRNGVTAKAIGYIGHLPSSVSTLDEQPKIISTNPMRTKTTLYDMQKLTDDLWISVQIRYNKVLDNGQLSPDLCHDKTRVN LKLPLVAVLMLWKLRGSEAMEHEENDYKYTGLSSASSMTNSM |
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