Gene
| Gene Model ID | pfu_aug2.0_385.1_17370 |
|---|---|
| Locus | scaffold385.1 : 284820 ... 293033 : - |
| To GenomeBrowser | scaffold385.1:284820..293033 |
| Genes list of scaffold | scaffold385.1 |
| Synonym | pfu_aug1.0_2305.1_08281 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_385.1_17370.t1 | 1 | 1 | Reeler | 63 | 184 | 2.7e-22 | 79.4 | 2.4e-26 | 3.5e-22 | 79.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_385.1_17370.t1 | gi|390356923|ref|XP_001200225.2| | PREDICTED: putative defense protein 3 [Strongylocentrotus purpuratus] | 2.0e-17 |
| pfu_aug2.0_385.1_17370.t1 | gi|751210797|ref|XP_011158111.1| | PREDICTED: putative defense protein 3 [Solenopsis invicta] | 2.0e-16 |
| pfu_aug2.0_385.1_17370.t1 | gi|746865849|ref|XP_011063964.1| | PREDICTED: putative defense protein 3 [Acromyrmex echinatior] | 1.0e-15 |
| pfu_aug2.0_385.1_17370.t1 | gi|752882439|ref|XP_011258869.1| | PREDICTED: putative defense protein 3 [Camponotus floridanus] | 1.0e-15 |
| pfu_aug2.0_385.1_17370.t1 | gi|755967760|ref|XP_011305937.1| | PREDICTED: putative defense protein 3 isoform X2 [Fopius arisanus] | 2.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_385.1_17370.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_385.1_17370.t1 atgcaaattgtgaaatccactcgcctaggaggaattatttgtgtattgttttgttgtgtgtttttgtgtttgactggtgt gaatggatacccgtatggcgccccggaaaactcctgtaacgacccggctcccatacatcaaagacgtttgaactctactc atgttgggatatattttcctcaagacatgtccacgagtcgatatagcttacttacatcttcatcgcgttatattaacgga atgatgatacgggttactctcagggctgcaccaggagattattttaagggatttttcattcaagccacaaaatcaaacta ttccctggaccgacccgacaggccagcttatggaaccttccgtccggttgaccagaactcagcacctcgttcttgtcgtg cggctgtcggcgtcgtcggcgggatcacacatacgggtaacaccaacaaaacggaagtgtctgttgattggataccgcca gtcgggtgtaacttaggagatgtccagtttgttgccacagttgtaaggggatacagtgagtactgggtggatattagatc agatgtaatccagccttcaggatttgtacgaagaagtctgctttgtgaattgtacgtggatccatataacagacgattac agagacgtgttttacaagcattgcgtgaattgaggagacgtcagaggcaacgcgggccaagaaggggttaa |
|
Protein
| Protein ID | pfu_aug2.0_385.1_17370.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_385.1_17370.t1 MQIVKSTRLGGIICVLFCCVFLCLTGVNGYPYGAPENSCNDPAPIHQRRLNSTHVGIYFPQDMSTSRYSLLTSSSRYING MMIRVTLRAAPGDYFKGFFIQATKSNYSLDRPDRPAYGTFRPVDQNSAPRSCRAAVGVVGGITHTGNTNKTEVSVDWIPP VGCNLGDVQFVATVVRGYSEYWVDIRSDVIQPSGFVRRSLLCELYVDPYNRRLQRRVLQALRELRRRQRQRGPRRG |
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