Gene
| Gene Model ID | pfu_aug2.0_385.1_17369 |
|---|---|
| Locus | scaffold385.1 : 275414 ... 276088 : + |
| To GenomeBrowser | scaffold385.1:275414..276088 |
| Genes list of scaffold | scaffold385.1 |
| Synonym | pfu_aug1.0_2305.1_08282 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_385.1_17369.t1 | 1 | 1 | Ank_2 | 8 | 73 | 8.0e-08 | 32.5 | 6.3e-11 | 1.5e-07 | 31.6 |
| pfu_aug2.0_385.1_17369.t1 | 2 | 1 | Ank_5 | 8 | 42 | 2.9e-06 | 27.3 | 1.3e-05 | 0.032 | 14.4 |
| pfu_aug2.0_385.1_17369.t1 | 2 | 1 | Ank | 9 | 30 | 9.9e-09 | 34.5 | 0.0025 | 6.2 | 6.8 |
| pfu_aug2.0_385.1_17369.t1 | 2 | 1 | Ank_3 | 9 | 30 | 4.6e-06 | 26.3 | 0.0093 | 23.0 | 5.6 |
| pfu_aug2.0_385.1_17369.t1 | 2 | 2 | Ank | 34 | 73 | 9.9e-09 | 34.5 | 2.7e-09 | 6.6e-06 | 25.6 |
| pfu_aug2.0_385.1_17369.t1 | 2 | 2 | Ank_3 | 34 | 71 | 4.6e-06 | 26.3 | 7.4e-07 | 0.0018 | 18.3 |
| pfu_aug2.0_385.1_17369.t1 | 2 | 2 | Ank_5 | 56 | 82 | 2.9e-06 | 27.3 | 0.00018 | 0.44 | 10.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_385.1_17369.t1 | gi|677986925|ref|XP_009074541.1| | PREDICTED: ankyrin repeat domain-containing protein 34A-like, partial [Acanthisitta chloris] | 4.0e-09 |
| pfu_aug2.0_385.1_17369.t1 | gi|301618220|ref|XP_002938522.1| | PREDICTED: ankyrin repeat domain-containing protein 34A [Xenopus (Silurana) tropicalis] | 2.0e-08 |
| pfu_aug2.0_385.1_17369.t1 | gi|564255130|ref|XP_006266542.1| | PREDICTED: ankyrin repeat domain-containing protein 34A [Alligator mississippiensis] | 5.0e-08 |
| pfu_aug2.0_385.1_17369.t1 | gi|390356892|ref|XP_003728880.1| | PREDICTED: ankyrin repeat domain-containing protein 34C-like [Strongylocentrotus purpuratus] | 6.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_385.1_17369.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_385.1_17369.t1 atgtcttcaaatgatttgctggatgccgtatcaaagggaaagtttcggttgagtaggattttgatagaaggtggcgcaga cacaaatgcttcacgagaggatggatgcacggtgctgatgttagcatgtatgttaaagacggatcgtaccgaaaaaagac gaaaggccaaactgattcagagcatcattgaaaatggcgcaaatttaaatgccaagaattcccgaggactttcttgttgg gattttttagaatgccagagtccggatcttcgacgttttgcaatccagcaaaggaagatttcggaaattatgatggaaga tcgtacaatcgtgaaaggaaagttatcgaaatgttccttgtttacctctcgaaatcgagcgaaacaatag |
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Protein
| Protein ID | pfu_aug2.0_385.1_17369.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_385.1_17369.t1 MSSNDLLDAVSKGKFRLSRILIEGGADTNASREDGCTVLMLACMLKTDRTEKRRKAKLIQSIIENGANLNAKNSRGLSCW DFLECQSPDLRRFAIQQRKISEIMMEDRTIVKGKLSKCSLFTSRNRAKQ |
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