Gene
| Gene Model ID | pfu_aug2.0_385.1_17363 |
|---|---|
| Locus | scaffold385.1 : 137986 ... 181497 : + |
| To GenomeBrowser | scaffold385.1:137986..181497 |
| Genes list of scaffold | scaffold385.1 |
| Synonym | pfu_aug1.0_2305.1_08287 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_385.1_17363.t1 | 5 | 1 | MIB_HERC2 | 5 | 67 | 4.79945e-42 | 141.7 | 2.8e-13 | 3.8e-10 | 39.5 |
| pfu_aug2.0_385.1_17363.t1 | 3 | 1 | ZZ | 76 | 109 | 2.7e-11 | 42.8 | 2.0e-14 | 2.7e-11 | 42.8 |
| pfu_aug2.0_385.1_17363.t1 | 5 | 2 | MIB_HERC2 | 87 | 93 | 4.79945e-42 | 141.7 | 9.3 | 13000.0 | -3.8 |
| pfu_aug2.0_385.1_17363.t1 | 5 | 3 | MIB_HERC2 | 297 | 365 | 4.79945e-42 | 141.7 | 1.1e-25 | 1.5e-22 | 79.3 |
| pfu_aug2.0_385.1_17363.t1 | 5 | 4 | MIB_HERC2 | 369 | 415 | 4.79945e-42 | 141.7 | 2.4e-12 | 3.2e-09 | 36.6 |
| pfu_aug2.0_385.1_17363.t1 | 3 | 2 | ZZ | 418 | 430 | 2.7e-11 | 42.8 | 2.8 | 3800.0 | -2.5 |
| pfu_aug2.0_385.1_17363.t1 | 5 | 5 | MIB_HERC2 | 567 | 585 | 4.79945e-42 | 141.7 | 2.7 | 3600.0 | -2.1 |
| pfu_aug2.0_385.1_17363.t1 | 4 | 1 | Ank_2 | 644 | 742 | 0.0 | 163.4 | 7.5e-19 | 1.0e-15 | 57.8 |
| pfu_aug2.0_385.1_17363.t1 | 6 | 1 | Ank_4 | 644 | 667 | 5.6e-33 | 112.7 | 2.7 | 3600.0 | -1.4 |
| pfu_aug2.0_385.1_17363.t1 | 9 | 1 | Ank_3 | 682 | 708 | 5.5e-37 | 122.1 | 3.3e-08 | 4.4e-05 | 23.3 |
| pfu_aug2.0_385.1_17363.t1 | 10 | 1 | Ank | 683 | 711 | 1.8e-39 | 131.5 | 4.9e-08 | 6.6e-05 | 22.5 |
| pfu_aug2.0_385.1_17363.t1 | 6 | 2 | Ank_4 | 683 | 732 | 5.6e-33 | 112.7 | 6.8e-13 | 9.1e-10 | 38.7 |
| pfu_aug2.0_385.1_17363.t1 | 7 | 1 | Ank_5 | 683 | 720 | 2.8e-29 | 100.4 | 3.8e-08 | 5.1e-05 | 23.3 |
| pfu_aug2.0_385.1_17363.t1 | 7 | 2 | Ank_5 | 699 | 741 | 2.8e-29 | 100.4 | 8.0e-08 | 0.00011 | 22.3 |
| pfu_aug2.0_385.1_17363.t1 | 10 | 2 | Ank | 712 | 742 | 1.8e-39 | 131.5 | 9.2e-06 | 0.012 | 15.3 |
| pfu_aug2.0_385.1_17363.t1 | 9 | 2 | Ank_3 | 712 | 741 | 5.5e-37 | 122.1 | 1.1e-06 | 0.0014 | 18.6 |
| pfu_aug2.0_385.1_17363.t1 | 4 | 2 | Ank_2 | 753 | 822 | 0.0 | 163.4 | 5.0e-17 | 6.7e-14 | 52.0 |
| pfu_aug2.0_385.1_17363.t1 | 9 | 3 | Ank_3 | 761 | 787 | 5.5e-37 | 122.1 | 3.3e-08 | 4.4e-05 | 23.3 |
| pfu_aug2.0_385.1_17363.t1 | 10 | 3 | Ank | 762 | 790 | 1.8e-39 | 131.5 | 4.9e-08 | 6.6e-05 | 22.5 |
| pfu_aug2.0_385.1_17363.t1 | 6 | 3 | Ank_4 | 762 | 811 | 5.6e-33 | 112.7 | 6.9e-13 | 9.3e-10 | 38.7 |
| pfu_aug2.0_385.1_17363.t1 | 7 | 3 | Ank_5 | 762 | 799 | 2.8e-29 | 100.4 | 3.7e-08 | 5.0e-05 | 23.4 |
| pfu_aug2.0_385.1_17363.t1 | 7 | 4 | Ank_5 | 778 | 829 | 2.8e-29 | 100.4 | 3.6e-10 | 4.8e-07 | 29.8 |
| pfu_aug2.0_385.1_17363.t1 | 10 | 4 | Ank | 791 | 822 | 1.8e-39 | 131.5 | 2.6e-06 | 0.0035 | 17.0 |
| pfu_aug2.0_385.1_17363.t1 | 9 | 4 | Ank_3 | 791 | 820 | 5.5e-37 | 122.1 | 1.1e-06 | 0.0014 | 18.6 |
| pfu_aug2.0_385.1_17363.t1 | 6 | 4 | Ank_4 | 806 | 844 | 5.6e-33 | 112.7 | 0.018 | 24.0 | 5.5 |
| pfu_aug2.0_385.1_17363.t1 | 10 | 5 | Ank | 831 | 847 | 1.8e-39 | 131.5 | 6.6 | 8900.0 | -3.2 |
| pfu_aug2.0_385.1_17363.t1 | 4 | 3 | Ank_2 | 832 | 917 | 0.0 | 163.4 | 3.6e-12 | 4.8e-09 | 36.4 |
| pfu_aug2.0_385.1_17363.t1 | 7 | 5 | Ank_5 | 847 | 900 | 2.8e-29 | 100.4 | 1.2e-07 | 0.00016 | 21.7 |
| pfu_aug2.0_385.1_17363.t1 | 10 | 6 | Ank | 859 | 885 | 1.8e-39 | 131.5 | 0.022 | 30.0 | 4.6 |
| pfu_aug2.0_385.1_17363.t1 | 9 | 5 | Ank_3 | 859 | 882 | 5.5e-37 | 122.1 | 0.031 | 41.0 | 4.8 |
| pfu_aug2.0_385.1_17363.t1 | 6 | 5 | Ank_4 | 861 | 913 | 5.6e-33 | 112.7 | 7.6e-08 | 0.0001 | 22.7 |
| pfu_aug2.0_385.1_17363.t1 | 7 | 6 | Ank_5 | 880 | 924 | 2.8e-29 | 100.4 | 1.5e-06 | 0.002 | 18.2 |
| pfu_aug2.0_385.1_17363.t1 | 10 | 7 | Ank | 892 | 915 | 1.8e-39 | 131.5 | 7.9e-10 | 1.1e-06 | 28.1 |
| pfu_aug2.0_385.1_17363.t1 | 9 | 6 | Ank_3 | 892 | 915 | 5.5e-37 | 122.1 | 3.4e-05 | 0.046 | 13.9 |
| pfu_aug2.0_385.1_17363.t1 | 4 | 4 | Ank_2 | 926 | 970 | 0.0 | 163.4 | 0.00018 | 0.24 | 11.7 |
| pfu_aug2.0_385.1_17363.t1 | 7 | 7 | Ank_5 | 928 | 967 | 2.8e-29 | 100.4 | 0.00011 | 0.14 | 12.4 |
| pfu_aug2.0_385.1_17363.t1 | 6 | 6 | Ank_4 | 929 | 975 | 5.6e-33 | 112.7 | 0.093 | 130.0 | 3.3 |
| pfu_aug2.0_385.1_17363.t1 | 10 | 8 | Ank | 930 | 955 | 1.8e-39 | 131.5 | 0.00062 | 0.84 | 9.5 |
| pfu_aug2.0_385.1_17363.t1 | 9 | 7 | Ank_3 | 930 | 954 | 5.5e-37 | 122.1 | 0.015 | 20.0 | 5.7 |
| pfu_aug2.0_385.1_17363.t1 | 9 | 8 | Ank_3 | 961 | 971 | 5.5e-37 | 122.1 | 3.7 | 5000.0 | -1.7 |
| pfu_aug2.0_385.1_17363.t1 | 10 | 9 | Ank | 962 | 976 | 1.8e-39 | 131.5 | 2.0 | 2600.0 | -1.5 |
| pfu_aug2.0_385.1_17363.t1 | 10 | 10 | Ank | 1008 | 1016 | 1.8e-39 | 131.5 | 6.6 | 8900.0 | -3.2 |
| pfu_aug2.0_385.1_17363.t1 | 9 | 9 | Ank_3 | 1008 | 1032 | 5.5e-37 | 122.1 | 0.73 | 980.0 | 0.5 |
| pfu_aug2.0_385.1_17363.t1 | 3 | 3 | ZZ | 1035 | 1041 | 2.7e-11 | 42.8 | 3.0 | 4100.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_385.1_17363.t1 | gi|742115917|ref|XP_010873708.1| | PREDICTED: E3 ubiquitin-protein ligase MIB2 isoform X5 [Esox lucius] | 0.0 |
| pfu_aug2.0_385.1_17363.t1 | gi|742115913|ref|XP_010873707.1| | PREDICTED: E3 ubiquitin-protein ligase MIB2 isoform X4 [Esox lucius] | 0.0 |
| pfu_aug2.0_385.1_17363.t1 | gi|742115901|ref|XP_010873704.1| | PREDICTED: E3 ubiquitin-protein ligase MIB2 isoform X1 [Esox lucius] | 0.0 |
| pfu_aug2.0_385.1_17363.t1 | gi|742115905|ref|XP_010873705.1| | PREDICTED: E3 ubiquitin-protein ligase MIB2 isoform X2 [Esox lucius] | 0.0 |
| pfu_aug2.0_385.1_17363.t1 | gi|551508635|ref|XP_005805846.1| | PREDICTED: E3 ubiquitin-protein ligase MIB2-like [Xiphophorus maculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_385.1_17363.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_385.1_17363.t1 atgatcagatctgggtcacgagtaatccgaggacctgattggtgtcatggtaaccaagatggcggagctggttacttagg aacagttttatttacatccaggcagactaaaagctgcaaagtacagtgggacttaggaaaaactacagactgtaaagcag aaggagacgacggaagctctgagatcagattgtatgataacaaagcaagtggtataaagtttgatggagtcacttgtgat ggatgtaaagaaaacaatgtacgtggaatacgctggaaatgcgtacagtgtgaagattatgatttgtgtacgtcttgtta ccatggagacgaacacgacagggaacatgaatttataagatttacaactagactgtcttctgggatcgtttaccctccga ggaaacggagcaagaaaattaagatttatggaattggcgtcggggcagaggttgtcggagagattgggacggtccagcgc tatttaggtggagacaaagtatcggtacactatacggtgtcgggtagagcttggactatttacaaaggagcatgtacaaa ggtttctgtgatagaaaatggagatgtggtgaaagttgtgagtgacgtgaagttcttccatatgatacagagtggaggac acgggggttatagtgacgacatgaagaagttgctagggaagcttgggcaggtgtttgaggtggaccattatggagatgta caggtggagtttccggggatcgggaagttttgtcttagtccgtctgtatgtgtaaaacagtacgatacgacactgaagaa agagaaagatatggaagcaatgagcccaactctttcagtcaccgaaggcaaatcagatgatagtaagacgggtatggtat ttgacattggtattcgggttgtacgaggtccgagctggtcgtggggagaccaagatggcggagagggttgtctgggaacg gtaacagagattggtcatgacgacacaacaggcaatgtgccgcccctctgcgccgaggtacagtgggatcatgggtacaa gaacacatacagagtgggctatgaaggcaactatgatgtgaggatttatgataccgcagctgtaggaggcgagggccagg aaggggagattatagccattgtaaacttctctctggaaacggacagagatggtgtggaggtgacctggggcaatggtcac tccaacgtttatcgccttggttacaagggcgctgtggatgtgaaaggctcacagtgtgtaacgagtggatactactacag ggaccatctcccaaattttaagctgccggagcactccagacgaggtccgagtcagcgtgagaaggaggagccatccgtgg acgcagaacaaaatgtagacgacggacgtataaagaaagacgaccaagtcaaaattggtgtcgatttagatattttacaa tccatccagaaagaagcaaatgcctggagcgacagaattgttgaatgcataggaaaaacaggaaaagtattgtttataga gggacaacttgccacagttgattttgatggccctaaatggcgacttcatgaaattgcccttgtcaaggtaacagagttta agattgaacaagtagttcggttaatgagcagtgcagacgatgttaggaggatgcagaacggacatggaccttgggaagat gacatgaaaaagtacttaggaaagaagggtaaagtgatcgaggtggattctgacggagacgtacacgtaacgtttgacaa catggtctggaagtttaacccggaatgcttagagcccgccactggggatgtggacacgtttgacgatcctgtgctcgaaa ggccaaggtcacctagccctgtacctgtacaaagactgccacctgttagggaggcgtgggaggacaatgtgaatggagag ttcgtaaaggcgctgaaggaaggaaatgataaaatgctgaggaaaatcttagacaaatatccacatttgataaatgagat agatcaagaggatgcacatgtcagccagaaaactgatcagggacctccattgttaatggccgttagaagtaagaggatag aagtggtcaaaatcttgctggagaagggagctgataaaaatgccgcgaacaacaacggtcaaacggctgtacatattgcg gtacagactaaaaatgctgatatgttacgtgtcctgaaaaactttgggtgtgacttcaacaagaagataaatgagataaa tcaagaggatgcacatgtcagccagaaaaccgatcagggacctccattgttaatggccgttagaagtaagaggatagaag tggtcaaaatcttgctggagaagggagctgataaaaatgccgcaaacaacaatggtcaaacggctgtacatatagcggta cagactaaaaacgctgatatgttacgtgtcctgaaaaactttgggtgtgacttcaacaagaaggatcaactcggagataa cccagtaacggatgctattactggaggagataggcagatcatggaacttatactgaggcatcctgggattgatttgaagt tcgaaaatagattaggattcagacccatccatacggccgctagaaaaggcgagaaatttgccgtagaggagattctgagc caacaccctggtgagttaaacagacctaaggaggacggctttactccccttcacttggccgcgtgtatgaaccacaaggg tatcgtccaagttctactcagcaagtcagaaatagagacggagacaaggacaaaggaagagaagttatctcccttgctga ttgcctgtctgtacggcagtgatgaggttatagaccctctacttagaggaagagtagatttagcagtagaagacagtgat aggaacaatgctctacatttatgtatgagaggcaagccttccgtcatggaattctctagggaaccatcaacggtgccgga tcaggggtgccggatcgaattctccagcaccactgaaaaggggaatcagcctatccagtgtggcaaataccccctggaca tcgcttgcgaccagtctctgaaagataggctgtatcaatatctgagagaaaaaggaattttgaactgtgatgcctgtgat gaagaggagcccaactataagttctctccatgcgcacacagtgtgtgtaacgactgcggagcaaagaaatgtaaacgatg tccagtggacggatgtcagaaagccgtgatcgacaggcagagactttag |
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Protein
| Protein ID | pfu_aug2.0_385.1_17363.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_385.1_17363.t1 MIRSGSRVIRGPDWCHGNQDGGAGYLGTVLFTSRQTKSCKVQWDLGKTTDCKAEGDDGSSEIRLYDNKASGIKFDGVTCD GCKENNVRGIRWKCVQCEDYDLCTSCYHGDEHDREHEFIRFTTRLSSGIVYPPRKRSKKIKIYGIGVGAEVVGEIGTVQR YLGGDKVSVHYTVSGRAWTIYKGACTKVSVIENGDVVKVVSDVKFFHMIQSGGHGGYSDDMKKLLGKLGQVFEVDHYGDV QVEFPGIGKFCLSPSVCVKQYDTTLKKEKDMEAMSPTLSVTEGKSDDSKTGMVFDIGIRVVRGPSWSWGDQDGGEGCLGT VTEIGHDDTTGNVPPLCAEVQWDHGYKNTYRVGYEGNYDVRIYDTAAVGGEGQEGEIIAIVNFSLETDRDGVEVTWGNGH SNVYRLGYKGAVDVKGSQCVTSGYYYRDHLPNFKLPEHSRRGPSQREKEEPSVDAEQNVDDGRIKKDDQVKIGVDLDILQ SIQKEANAWSDRIVECIGKTGKVLFIEGQLATVDFDGPKWRLHEIALVKVTEFKIEQVVRLMSSADDVRRMQNGHGPWED DMKKYLGKKGKVIEVDSDGDVHVTFDNMVWKFNPECLEPATGDVDTFDDPVLERPRSPSPVPVQRLPPVREAWEDNVNGE FVKALKEGNDKMLRKILDKYPHLINEIDQEDAHVSQKTDQGPPLLMAVRSKRIEVVKILLEKGADKNAANNNGQTAVHIA VQTKNADMLRVLKNFGCDFNKKINEINQEDAHVSQKTDQGPPLLMAVRSKRIEVVKILLEKGADKNAANNNGQTAVHIAV QTKNADMLRVLKNFGCDFNKKDQLGDNPVTDAITGGDRQIMELILRHPGIDLKFENRLGFRPIHTAARKGEKFAVEEILS QHPGELNRPKEDGFTPLHLAACMNHKGIVQVLLSKSEIETETRTKEEKLSPLLIACLYGSDEVIDPLLRGRVDLAVEDSD RNNALHLCMRGKPSVMEFSREPSTVPDQGCRIEFSSTTEKGNQPIQCGKYPLDIACDQSLKDRLYQYLREKGILNCDACD EEEPNYKFSPCAHSVCNDCGAKKCKRCPVDGCQKAVIDRQRL |
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