Gene
| Gene Model ID | pfu_aug2.0_3827.1_25847 |
|---|---|
| Locus | scaffold3827.1 : 40136 ... 53247 : + |
| To GenomeBrowser | scaffold3827.1:40136..53247 |
| Genes list of scaffold | scaffold3827.1 |
| Synonym | pfu_aug1.0_10623.1_31944 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3827.1_25847.t1 | 2 | 1 | AMOP | 185 | 200 | 4.3e-11 | 43.0 | 0.76 | 3700.0 | -2.3 |
| pfu_aug2.0_3827.1_25847.t1 | 1 | 1 | NIDO | 197 | 270 | 7.7e-09 | 36.1 | 6.1e-12 | 3.0e-08 | 34.2 |
| pfu_aug2.0_3827.1_25847.t1 | 2 | 2 | AMOP | 519 | 588 | 4.3e-11 | 43.0 | 8.7e-15 | 4.3e-11 | 43.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3827.1_25847.t1 | gi|308501939|ref|XP_003113154.1| | hypothetical protein CRE_25529 [Caenorhabditis remanei] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3827.1_25847.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3827.1_25847.t1 atggcaattaccacaacatcaaaagtgctaccacagtcaagggagaaagtcttcgtccttagggaacgcaatgataaagt ccgagatgcctcaaaagtacctcagtcaccgttatacccagaggatgggagtacacagctaacccaaagtactcagcaag tcaatctgccttccggagttacgttccctttctttggaaaaatctacaatgccctctatgtgtccaaagacgggctagtg gggttctcatcccaagctgcgtacaagagtactgtatactctaagtaccagacctattacgtcgccttgaatgattaccc cttcgccgcagccttccattttgcggctgtttctctcggctctgttacatctgctggagaaacataccgaggagttacga agtacagacaaattctttcagccaatgaggaaagtcgtaacatttcaaatttcatacgagaggcttttcctggacaggat acgttccaagctacgtatgtcctcgtggttacgtggagagatgtttttgacttgagggaacaatctgtagtaaactgtca gtaccagactgaaccaaatatatgtaagacaaacacgttccaacaagtgatggtgacagatggaacatcgagttttgcca tattcaattatcttaaaactgacgtcaaaacatctcccactacacaatcaggattcaacgggggaaatgggcgtggttgg tcagaagccattaaaagtgggtcactacaaacggccagtgcaaatcaaggaagtgacgtagtaggacgatatgtgtacca gatagatgacgctgttatatacaaaggaggttgtactccacaaaaatttaacacagatttttttagatcaatcacaagtt cagatttgcttccagaatctctctacattaaacagcaatatgctgggatgtttggaggggagatgatagattttaacgga ccatgtttggctagtaacaacaagattaagtgtaaatttggacataattctggagaaaggactacaactggaataatggt caatagtatgagaggacgatgtctagtaccaacattactggagcgtggtagggtccctgtgagagtatctctcaatgatg gattgagttattacttttcgtcagaactgactatagtacatccaaatcgaatgccgagtatattgtccaatggaaaagga tggaatgaaacgacgtctacgtcactgagtatgagttggcatcctgacgatttgaccaatgtatcaagtgccttggtgga tgttacattgataggatataaagaaactctagtaagatcctcatgggataatttactgaccatatcacaagagatacccg taagccaaggccaatttacatttaatgtcaaggacgcactgtgtaacgatgactgctcttcttatgaaataggctttgtt caaatcaaacttcacaatatgtccttggctacatcacacggatttctagtcagcagtatcctaccactaggatttcttat gaataaaagaatgaccgaaaagtacggcgctaactggccacatgataaatgcatagcctggtacaacaaggatagcatgg acacttcttggctgaccgccatccctagttgtccgtgtaacctacagcaagccatagtggacataggaaattggcagcca gatcttgggtgtaatttatattccaagagaaatggaaattgcctcttccaccaaaaagctgtgcattgtgtactatccgt acaaccaaccatacataa |
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Protein
| Protein ID | pfu_aug2.0_3827.1_25847.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3827.1_25847.t1 MAITTTSKVLPQSREKVFVLRERNDKVRDASKVPQSPLYPEDGSTQLTQSTQQVNLPSGVTFPFFGKIYNALYVSKDGLV GFSSQAAYKSTVYSKYQTYYVALNDYPFAAAFHFAAVSLGSVTSAGETYRGVTKYRQILSANEESRNISNFIREAFPGQD TFQATYVLVVTWRDVFDLREQSVVNCQYQTEPNICKTNTFQQVMVTDGTSSFAIFNYLKTDVKTSPTTQSGFNGGNGRGW SEAIKSGSLQTASANQGSDVVGRYVYQIDDAVIYKGGCTPQKFNTDFFRSITSSDLLPESLYIKQQYAGMFGGEMIDFNG PCLASNNKIKCKFGHNSGERTTTGIMVNSMRGRCLVPTLLERGRVPVRVSLNDGLSYYFSSELTIVHPNRMPSILSNGKG WNETTSTSLSMSWHPDDLTNVSSALVDVTLIGYKETLVRSSWDNLLTISQEIPVSQGQFTFNVKDALCNDDCSSYEIGFV QIKLHNMSLATSHGFLVSSILPLGFLMNKRMTEKYGANWPHDKCIAWYNKDSMDTSWLTAIPSCPCNLQQAIVDIGNWQP DLGCNLYSKRNGNCLFHQKAVHCVLSVQPTIH |
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