Gene
| Gene Model ID | pfu_aug2.0_3827.1_25845 |
|---|---|
| Locus | scaffold3827.1 : 9766 ... 11429 : + |
| To GenomeBrowser | scaffold3827.1:9766..11429 |
| Genes list of scaffold | scaffold3827.1 |
| Synonym | pfu_aug1.0_5151.1_30878 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3827.1_25845.t1 | 1 | 1 | Phage_integrase | 70 | 139 | 1.5e-07 | 31.2 | 3.9e-11 | 1.9e-07 | 30.8 |
Transcript
| Transcript ID | pfu_aug2.0_3827.1_25845.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3827.1_25845.t1 atgtcgaaagaaacatttcgtgtcaggactgacgaaaactctggaaaaaaatacgttgaaaaagcggtagatgaactgac gaaaaaccataggttcgacaaggaagcatcttctggtgtcatgccggcaatggaaggatcctcccagtgtccagtggcat cgttcgagttgtacttgtcaaaactgcatccgtataacgaccggtatgcaaatgtccctgttggtgagaagaaactaagt gcgttcatgagtgacctaagcaaagccgctggtttgagccaaaaatatactaaccattccatccgtgctacaggtgccac cgtactatctaaggggatgtttgggccatctcaggtgatggccgtcactggccataaatccgtccaaagcttgagcgtct atcagcgtgtaagcgacggccagaaaattcagatgggtcaggtgctatcaaaaaccttagttaattgtagtagtaatgct cttgtcccagttgtgaaaagtgctacatgtgttcgtgatccgctttcctgtattgataacgcaccggtaaaacacaacgc cattgggccgagctcgactatctccagtgtatcgtccacggataaagaagcatcgcaggatatggaaatagccgtagctc atgaaattgcagacgttaatatggatgacctcttttgtgactttttcaaagcgagcgacaataccagaccaatggagtgt tccgttattacaaatcccaaaccacacatgcctccaatagtatttactaattgtactgttaatattgccaatttaaacat taccaaaaagtag |
|
Protein
| Protein ID | pfu_aug2.0_3827.1_25845.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3827.1_25845.t1 MSKETFRVRTDENSGKKYVEKAVDELTKNHRFDKEASSGVMPAMEGSSQCPVASFELYLSKLHPYNDRYANVPVGEKKLS AFMSDLSKAAGLSQKYTNHSIRATGATVLSKGMFGPSQVMAVTGHKSVQSLSVYQRVSDGQKIQMGQVLSKTLVNCSSNA LVPVVKSATCVRDPLSCIDNAPVKHNAIGPSSTISSVSSTDKEASQDMEIAVAHEIADVNMDDLFCDFFKASDNTRPMEC SVITNPKPHMPPIVFTNCTVNIANLNITKK |
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