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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_3801.1_05897
Locus scaffold3801.1 : 32696 ... 44652 : +
To GenomeBrowser scaffold3801.1:32696..44652
Genes list of scaffold scaffold3801.1
Synonym pfu_aug1.0_12609.1_61073

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_3801.1_05897.t1 gi|585668113|ref|XP_006817440.1| PREDICTED: interferon-induced protein 44-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_3801.1_05897.t1 gi|260823822|ref|XP_002606867.1| hypothetical protein BRAFLDRAFT_91636 [Branchiostoma floridae] 0.0
pfu_aug2.0_3801.1_05897.t1 gi|528516109|ref|XP_005170564.1| PREDICTED: interferon-induced protein 44-like isoform X2 [Danio rerio] 0.0

Transcript
Transcript IDpfu_aug2.0_3801.1_05897.t1
Definition-
>pfu_aug2.0_3801.1_05897.t1
atggccgcagctggaatcgaacccggatctttagcaaggccctttgcgagaatgtttccatacggccataaaagtgaaat
agagcaatattcaccacttcaagatcaaggtgtgtccgaggataaaatccagtatgttaatattctgatgttaggtccag
ttggggcaggcaagtctagtttcttcaacaccatcaactcgatctttaaggaacgtctcgcaatacaagcgagatcggga
agcgcagataccagtcttacaaaaacattcgatgtttactctgtgaaatctaaacaaaagcggtctccaatgaagttcag
gctttgcgactgtcgaggactggaggacgcacagggacttgagactagagacatagaatacatattggatggccaagtca
aaaatggatatgtgtttaactccggcactcatattacaaaggataattcgaaatttagaaggaacccaactataggcgat
atgatccattgcgttgtattttttgttgactccaatagtcccccggatatgatcatgacagaaaaggtaaaggagcaagt
acgaaatttacaggaaataatgaactacaaacgaattccacagctcgttttactcacgaaggtggattgcttgagtccag
tatttgaacgagacccctccttggtattcaggagcaaaaaagttcaagacattgtcaacaaggtggccaactcacttgga
ttgcctccatactcagtactgcctatacagaatgtagctaactcaccaaaagtgtccgaaggtgcaagtatcatggcact
ttatcatttacgccaaattctacgtgcttcagatgattttctggataatttcgtagatgatcttatgacagacaacttag
agggatttcagttgcaggcacaagtgtcttcacgtgactga

Protein
Protein IDpfu_aug2.0_3801.1_05897.t1
Definition-
>pfu_aug2.0_3801.1_05897.t1
MAAAGIEPGSLARPFARMFPYGHKSEIEQYSPLQDQGVSEDKIQYVNILMLGPVGAGKSSFFNTINSIFKERLAIQARSG
SADTSLTKTFDVYSVKSKQKRSPMKFRLCDCRGLEDAQGLETRDIEYILDGQVKNGYVFNSGTHITKDNSKFRRNPTIGD
MIHCVVFFVDSNSPPDMIMTEKVKEQVRNLQEIMNYKRIPQLVLLTKVDCLSPVFERDPSLVFRSKKVQDIVNKVANSLG
LPPYSVLPIQNVANSPKVSEGASIMALYHLRQILRASDDFLDNFVDDLMTDNLEGFQLQAQVSSRD

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