Gene
| Gene Model ID | pfu_aug2.0_360.1_00657 |
|---|---|
| Locus | scaffold360.1 : 296426 ... 307694 : + |
| To GenomeBrowser | scaffold360.1:296426..307694 |
| Genes list of scaffold | scaffold360.1 |
| Synonym | pfu_aug1.0_547.1_00379 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_360.1_00657.t1 | 3 | 1 | DUF3456 | 28 | 86 | 9.8e-11 | 41.8 | 6.2e-12 | 1.5e-08 | 34.7 |
| pfu_aug2.0_360.1_00657.t1 | 6 | 1 | EGF_CA | 82 | 90 | 7.5e-08 | 32.2 | 3.1 | 7800.0 | -3.1 |
| pfu_aug2.0_360.1_00657.t1 | 3 | 2 | DUF3456 | 87 | 131 | 9.8e-11 | 41.8 | 2.2e-06 | 0.0054 | 16.7 |
| pfu_aug2.0_360.1_00657.t1 | 6 | 2 | EGF_CA | 139 | 156 | 7.5e-08 | 32.2 | 6.0 | 15000.0 | -5.1 |
| pfu_aug2.0_360.1_00657.t1 | 6 | 3 | EGF_CA | 143 | 183 | 7.5e-08 | 32.2 | 6.0 | 15000.0 | -7.2 |
| pfu_aug2.0_360.1_00657.t1 | 6 | 4 | EGF_CA | 205 | 233 | 7.5e-08 | 32.2 | 6.0 | 15000.0 | -6.2 |
| pfu_aug2.0_360.1_00657.t1 | 3 | 3 | DUF3456 | 206 | 206 | 9.8e-11 | 41.8 | 6.0 | 15000.0 | -8.9 |
| pfu_aug2.0_360.1_00657.t1 | 6 | 5 | EGF_CA | 235 | 266 | 7.5e-08 | 32.2 | 9.6e-06 | 0.024 | 14.6 |
| pfu_aug2.0_360.1_00657.t1 | 6 | 6 | EGF_CA | 295 | 335 | 7.5e-08 | 32.2 | 5.9e-11 | 1.5e-07 | 31.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_360.1_00657.t1 | gi|524900454|ref|XP_005106647.1| | PREDICTED: cysteine-rich with EGF-like domain protein 2-A-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_360.1_00657.t1 | gi|524900452|ref|XP_005106646.1| | PREDICTED: cysteine-rich with EGF-like domain protein 2-A-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_360.1_00657.t1 | gi|524900456|ref|XP_005106648.1| | PREDICTED: cysteine-rich with EGF-like domain protein 2-A-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_360.1_00657.t1 | gi|657757297|ref|XP_008314121.1| | PREDICTED: cysteine-rich with EGF-like domain protein 2 [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_360.1_00657.t1 | gi|348515135|ref|XP_003445095.1| | PREDICTED: cysteine-rich with EGF-like domain protein 2-like isoform X1 [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_360.1_00657.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00657.t1 atgagagtagaactcaatttgttttataacgagattctgtcactggttttgatttcttgtgtgtatgcagcatcaaaatc agaaaaatgtacaatatgcagagacatagagaaaaacttttttgagggactcaaaaagacagccaaatccaattttggag gtggtaatactaactgggaggaaagtcgtctaggcagctatgcattcagtgaaacacgtctggtagaaattgtagagaaa ctgtgtgagagctccagcaaagattgtcatacatttgtcgaggagcatgaggagttgatagagaaattttggttcagcac atttgccaaaagtaaaggagaagataaaaacttttttgcctggttatgtatagaaaatgtgaaagtttgttgtccaagta atacatacggaccatcgtgcaagccttgtcctggaggaactaagagaccatgtaatgataatggcaaatgtgatggagag gggaccagaggtggtaagggtacctgctcatgtaattcaggctaccaaggctcactctgtgataattgttctgatggaca ctttgaagaagtcaaaaatgaaactcacactatttgcaaagcttgccatagatcatgtaaatccacatgttgggaggagg gcccaaaaggctgtgatgagtgtaaggagggatggatacagtctgaggaagagggctgtaaggatatgaatgaatgtgaa agggagacaaacccatgtagtgaagatcagtattgtggcaataatgaggggtcatattactgtgctaaatgtcatttagc ttgtaaaggatgtacgcagtatggagtggaaaaatgtaaagagtgtgcagagggctatcagctagtaggatccgcctgta cagatattgatgaatgccagtctgaccctaatccctgtacaggacaacataggaaatgtgtcaataatcacgggggatac tcgtgtgattgtatagagggctttattgagggagagggagaatgtataccaaaacctaaagaagacaatggaaatattgg agaagataaagaaacattagaagaaaaagaaaataaagataacaaagaagagttatga |
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Protein
| Protein ID | pfu_aug2.0_360.1_00657.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_360.1_00657.t1 MRVELNLFYNEILSLVLISCVYAASKSEKCTICRDIEKNFFEGLKKTAKSNFGGGNTNWEESRLGSYAFSETRLVEIVEK LCESSSKDCHTFVEEHEELIEKFWFSTFAKSKGEDKNFFAWLCIENVKVCCPSNTYGPSCKPCPGGTKRPCNDNGKCDGE GTRGGKGTCSCNSGYQGSLCDNCSDGHFEEVKNETHTICKACHRSCKSTCWEEGPKGCDECKEGWIQSEEEGCKDMNECE RETNPCSEDQYCGNNEGSYYCAKCHLACKGCTQYGVEKCKECAEGYQLVGSACTDIDECQSDPNPCTGQHRKCVNNHGGY SCDCIEGFIEGEGECIPKPKEDNGNIGEDKETLEEKENKDNKEEL |
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