Gene
| Gene Model ID | pfu_aug2.0_3557.1_25786 |
|---|---|
| Locus | scaffold3557.1 : 14625 ... 27395 : - |
| To GenomeBrowser | scaffold3557.1:14625..27395 |
| Genes list of scaffold | scaffold3557.1 |
| Synonym | pfu_aug1.0_4748.1_16494 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3557.1_25786.t1 | 1 | 1 | Lipocalin | 114 | 241 | 3.8e-10 | 39.8 | 1.1e-13 | 5.6e-10 | 39.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3557.1_25786.t1 | gi|696990992|ref|XP_009562840.1| | PREDICTED: fatty acid-binding protein, heart [Cuculus canorus] | 4.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_3557.1_25786.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3557.1_25786.t1 atgtcacggggaacgagtaagggatgggtacatgactatcaggacgcatgcgtagacaaagttgaaaaattcttaggtgg agaaaatactcccacacgtcttgagaaatcatcgagtcgaagcacgcctgagaatgcgttgtcgcgcccatctcctgaaa gggcgggacttaatggaaaacgtggttctagagatatgattggtgaaggaaacctcggaatgatgtcttctgggttacgg ggttctccgcgccagataagctaccgtgttttcctacgcccatttgcagctgcacaattatttgcagtgaatagaataaa accagacatggcttcgctcaatggaacatggaaacttatagcgatagagaagttcgaagaatttatgaaggctatagatg ttagtgaggagaacaaacagaaaggattgaaactcttgacaccagaaaatgacataaagcaggagatatcagtggaagga gacaaggtctgtattaagacggtcacaccattgtcaacacaggaacacaaaggaaacattgggcaggagtttgatcaacc cggttgggatggtagaccggtcaaggcaacatttatacttgatggtgacaaattggtagagaatctatcgggtccgtaca cagcctctaacacccgctacgtaaaggatgggaacctaataatggaacagaaatgtggatcagtgacttcaacaagaacg tacagcaaatcttaa |
|
Protein
| Protein ID | pfu_aug2.0_3557.1_25786.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3557.1_25786.t1 MSRGTSKGWVHDYQDACVDKVEKFLGGENTPTRLEKSSSRSTPENALSRPSPERAGLNGKRGSRDMIGEGNLGMMSSGLR GSPRQISYRVFLRPFAAAQLFAVNRIKPDMASLNGTWKLIAIEKFEEFMKAIDVSEENKQKGLKLLTPENDIKQEISVEG DKVCIKTVTPLSTQEHKGNIGQEFDQPGWDGRPVKATFILDGDKLVENLSGPYTASNTRYVKDGNLIMEQKCGSVTSTRT YSKS |
|