Gene
| Gene Model ID | pfu_aug2.0_355.1_17328 |
|---|---|
| Locus | scaffold355.1 : 204391 ... 212671 : - |
| To GenomeBrowser | scaffold355.1:204391..212671 |
| Genes list of scaffold | scaffold355.1 |
| Synonym | pfu_aug1.0_8075.1_45804 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_355.1_17328.t1 | 3 | 1 | DUF3657 | 111 | 174 | 3.2e-20 | 71.9 | 1.4e-19 | 2.0e-15 | 56.5 |
| pfu_aug2.0_355.1_17328.t1 | 3 | 2 | DUF3657 | 307 | 347 | 3.2e-20 | 71.9 | 3.1e-07 | 0.0045 | 17.0 |
| pfu_aug2.0_355.1_17328.t1 | 3 | 3 | DUF3657 | 395 | 401 | 3.2e-20 | 71.9 | 0.58 | 8600.0 | -3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_355.1_17328.t1 | gi|676424103|ref|XP_009044195.1| | hypothetical protein LOTGIDRAFT_103141 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_355.1_17328.t1 | gi|242012703|ref|XP_002427067.1| | conserved hypothetical protein [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_355.1_17328.t1 | gi|556977753|ref|XP_005996077.1| | PREDICTED: protein FAM135A-like isoform X5 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_355.1_17328.t1 | gi|573902077|ref|XP_006638764.1| | PREDICTED: protein FAM135A-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_355.1_17328.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_355.1_17328.t1 atgagtgatctccaagctacgcttgaattttctgtggagttcagcaagttttataatgtggacttgtttcagcgagggta ctatcaaatcaggacaacactgaagtcatctcctaagctacctgtaaaaatagaggtcactcttttaaaggcatcagagg aatctttggttctgccttcatgcgttgtgaacggtacagctgtcagtaaaacgttccagatactttaccgtaatgaagac ctgagtatcagtgatgtagtactctacagacttcatactctagtagatagtaataagatagaagaatgtttggagaaagc agattttcagcttgtaatagaactctggttttcagaggaggatataggaccccagggacttcaggagaagatggagaatg tcagtcagaggaccatggcccttcattttagtcctaccaagggtttacatcatcatataccactactctttgattacttc catctctgtgctgtggaacttacggttcacggtacccttatagcactacaccaaccttatattaatatgccaaaagctcc caaatctgcgtggactaacaagtctggtagtgatcaaccgtcaactcttgaaatggtttactttggaagtagaacagtgt caggggatcccataaatagctcgaccatgaaactgcacaatgcctataatgtacacaaacgactgtgtaaaattctgcta tgtgcttatgaaaccttgcagtctacctttaacctgtacctatcaaaaatgaaagatgctgaattcaatcttgatataaa agactgtcataaaagactggagacaattgttaacaatctgcagaactttgataatgaagaggatttgttacaaacggcaa ccacagacatcacgcaattatgtgccgagaacgtcatcttatggacccagttcttggaagttgtttcccttgacaaaaac gtccttgtttacttagctaaggaacatcacatcacaagggtaaaacgatttgcagagggatttttcacccatgactattc aaaaccagaatgcctttcttgctatgaaccaaattaccatggacacacagattctgctgccatggtaaagagctcacctt acttccagaatttaccagcccttacagtagagtgtgtggagctagatggtgaccataccacattgccagttatatttgag gatgtatactgtgaccatgtagtgaacaatagtggtgagtaccaagcatacttataa |
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Protein
| Protein ID | pfu_aug2.0_355.1_17328.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_355.1_17328.t1 MSDLQATLEFSVEFSKFYNVDLFQRGYYQIRTTLKSSPKLPVKIEVTLLKASEESLVLPSCVVNGTAVSKTFQILYRNED LSISDVVLYRLHTLVDSNKIEECLEKADFQLVIELWFSEEDIGPQGLQEKMENVSQRTMALHFSPTKGLHHHIPLLFDYF HLCAVELTVHGTLIALHQPYINMPKAPKSAWTNKSGSDQPSTLEMVYFGSRTVSGDPINSSTMKLHNAYNVHKRLCKILL CAYETLQSTFNLYLSKMKDAEFNLDIKDCHKRLETIVNNLQNFDNEEDLLQTATTDITQLCAENVILWTQFLEVVSLDKN VLVYLAKEHHITRVKRFAEGFFTHDYSKPECLSCYEPNYHGHTDSAAMVKSSPYFQNLPALTVECVELDGDHTTLPVIFE DVYCDHVVNNSGEYQAYL |
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