Gene
| Gene Model ID | pfu_aug2.0_3438.1_29101 |
|---|---|
| Locus | scaffold3438.1 : 34716 ... 38485 : - |
| To GenomeBrowser | scaffold3438.1:34716..38485 |
| Genes list of scaffold | scaffold3438.1 |
| Synonym | pfu_aug1.0_2607.1_30177 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3438.1_29101.t1 | 2 | 1 | Methyltransf_31 | 59 | 79 | 3.2e-07 | 30.0 | 2.6 | 3500.0 | -2.6 |
| pfu_aug2.0_3438.1_29101.t1 | 2 | 1 | GCD14 | 62 | 197 | 0.0 | 255.8 | 0.0 | 0.0 | 232.7 |
| pfu_aug2.0_3438.1_29101.t1 | 2 | 2 | Methyltransf_31 | 102 | 196 | 3.2e-07 | 30.0 | 7.1e-10 | 9.6e-07 | 28.5 |
| pfu_aug2.0_3438.1_29101.t1 | 1 | 1 | Methyltransf_18 | 102 | 182 | 5.4e-07 | 30.1 | 6.9e-10 | 9.4e-07 | 29.4 |
| pfu_aug2.0_3438.1_29101.t1 | 1 | 1 | Methyltransf_26 | 102 | 182 | 1.7e-06 | 28.0 | 2.4e-09 | 3.2e-06 | 27.1 |
| pfu_aug2.0_3438.1_29101.t1 | 2 | 2 | GCD14 | 198 | 293 | 0.0 | 255.8 | 9.2e-08 | 0.00012 | 21.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3438.1_29101.t1 | gi|40643016|emb|CAD91434.1| | hypotheitcal protein [Crassostrea gigas] | 0.0 |
| pfu_aug2.0_3438.1_29101.t1 | gi|260830499|ref|XP_002610198.1| | hypothetical protein BRAFLDRAFT_114350 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_3438.1_29101.t1 | gi|524864732|ref|XP_005089200.1| | PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_3438.1_29101.t1 | gi|291225928|ref|XP_002732949.1| | PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_3438.1_29101.t1 | gi|529446670|ref|XP_005243039.1| | PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A [Falco peregrinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3438.1_29101.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3438.1_29101.t1 atgagttttgataattatcataaagttgtggaagaaaatgatacagttattttgtatctagggtacgaaaatatgcattc tataaaggttagaggtggacatacatttcagacgaaatatggcgcacttagacactcggacctccttgggaaaccttatg gaagtaaaatacagtgtcccaagggctatctttatgttttacatccaactcctgaactatggacacagaatttacctcac agaacccagattttatattccacagatataagcattgtgactttccaattggatgtcaggcctggatccgtagttgtaga atcaggaacagggagtggatcactgtcacacgccctcatcagatccctcctaccatccggacaccttcacacctttgaat tccacaaggaaagagcagaaaaagctgagcaagagttcaaagagcatggcctggaatcgtatgtcactgtaaatcataga gatgtgtgtcagaatggctttgatctagagcatgtggctgatgctgtatttctggatcttccagtaccttgggaagcatt accaagtgctaaaacagctttgaaaaaagaagtgaggaactttgacgtgaggacggtaaatctcccaatagctgacctcg gaggaggtgattgcgaagaagcttcaagtataaagaaggaaaaaaacactgttgacgaggaatctgacaaaaagcaagaa attgtcaaaactaacactgatggtgataaatcaggtgctgagaatgctaaacaaacttttgactttataggaaagaaaga agataaaaatttttatttcaagtctggtgtagcgccaacacaaatgccaggacacactggctatttaacttttgctactc tctatcctgcataa |
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Protein
| Protein ID | pfu_aug2.0_3438.1_29101.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3438.1_29101.t1 MSFDNYHKVVEENDTVILYLGYENMHSIKVRGGHTFQTKYGALRHSDLLGKPYGSKIQCPKGYLYVLHPTPELWTQNLPH RTQILYSTDISIVTFQLDVRPGSVVVESGTGSGSLSHALIRSLLPSGHLHTFEFHKERAEKAEQEFKEHGLESYVTVNHR DVCQNGFDLEHVADAVFLDLPVPWEALPSAKTALKKEVRNFDVRTVNLPIADLGGGDCEEASSIKKEKNTVDEESDKKQE IVKTNTDGDKSGAENAKQTFDFIGKKEDKNFYFKSGVAPTQMPGHTGYLTFATLYPA |
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