Gene
| Gene Model ID | pfu_aug2.0_3349.1_32453 |
|---|---|
| Locus | scaffold3349.1 : 30918 ... 34015 : - |
| To GenomeBrowser | scaffold3349.1:30918..34015 |
| Genes list of scaffold | scaffold3349.1 |
| Synonym | pfu_aug1.0_4501.1_23591 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3349.1_32453.t1 | 4 | 1 | UPF0154 | 7 | 15 | 1.3e-06 | 27.9 | 7.6 | 4500.0 | -2.7 |
| pfu_aug2.0_3349.1_32453.t1 | 2 | 1 | EF-hand_4 | 13 | 75 | 2.6e-08 | 33.5 | 6.0e-05 | 0.035 | 13.8 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 1 | EF-hand_1 | 14 | 42 | 1.9e-36 | 120.5 | 1.7e-10 | 9.9e-08 | 30.7 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 1 | EF-hand_8 | 14 | 34 | 1.8e-30 | 104.3 | 0.0014 | 0.81 | 9.3 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 1 | EF-hand_6 | 14 | 43 | 1.1e-28 | 96.4 | 3.3e-11 | 2.0e-08 | 33.4 |
| pfu_aug2.0_3349.1_32453.t1 | 2 | 1 | EF-hand_7 | 15 | 75 | 1.6e-32 | 111.4 | 3.7e-18 | 2.2e-15 | 56.5 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 1 | EF-hand_5 | 15 | 39 | 2.6e-17 | 61.2 | 2.5e-05 | 0.015 | 14.6 |
| pfu_aug2.0_3349.1_32453.t1 | 2 | 1 | SPARC_Ca_bdg | 15 | 72 | 9.1e-06 | 25.6 | 5.7e-06 | 0.0034 | 17.3 |
| pfu_aug2.0_3349.1_32453.t1 | 2 | 1 | EF-hand_9 | 18 | 77 | 5.1e-15 | 55.1 | 2.6e-09 | 1.5e-06 | 27.9 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 2 | EF-hand_8 | 30 | 77 | 1.8e-30 | 104.3 | 3.3e-15 | 2.0e-12 | 46.5 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 2 | UPF0154 | 30 | 59 | 1.3e-06 | 27.9 | 0.0001 | 0.061 | 12.9 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 2 | EF-hand_1 | 50 | 77 | 1.9e-36 | 120.5 | 2.6e-13 | 1.6e-10 | 39.5 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 2 | EF-hand_6 | 51 | 77 | 1.1e-28 | 96.4 | 2.2e-07 | 0.00013 | 21.5 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 2 | EF-hand_5 | 51 | 75 | 2.6e-17 | 61.2 | 2.7e-07 | 0.00016 | 20.8 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 3 | UPF0154 | 70 | 93 | 1.3e-06 | 27.9 | 0.12 | 73.0 | 3.0 |
| pfu_aug2.0_3349.1_32453.t1 | 2 | 2 | SPARC_Ca_bdg | 81 | 145 | 9.1e-06 | 25.6 | 0.0095 | 5.6 | 7.0 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 3 | EF-hand_8 | 84 | 101 | 1.8e-30 | 104.3 | 0.064 | 38.0 | 3.9 |
| pfu_aug2.0_3349.1_32453.t1 | 2 | 2 | EF-hand_4 | 86 | 148 | 2.6e-08 | 33.5 | 7.6e-07 | 0.00045 | 19.9 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 3 | EF-hand_1 | 87 | 115 | 1.9e-36 | 120.5 | 5.1e-08 | 3.0e-05 | 23.0 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 3 | EF-hand_6 | 87 | 116 | 1.1e-28 | 96.4 | 4.2e-08 | 2.5e-05 | 23.7 |
| pfu_aug2.0_3349.1_32453.t1 | 2 | 2 | EF-hand_7 | 88 | 148 | 1.6e-32 | 111.4 | 3.3e-18 | 2.0e-15 | 56.6 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 3 | EF-hand_5 | 89 | 111 | 2.6e-17 | 61.2 | 0.0027 | 1.6 | 8.2 |
| pfu_aug2.0_3349.1_32453.t1 | 2 | 2 | EF-hand_9 | 91 | 149 | 5.1e-15 | 55.1 | 1.3e-08 | 7.6e-06 | 25.7 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 4 | EF-hand_8 | 100 | 149 | 1.8e-30 | 104.3 | 6.6e-19 | 3.9e-16 | 58.3 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 4 | UPF0154 | 103 | 130 | 1.3e-06 | 27.9 | 0.00014 | 0.085 | 12.4 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 4 | EF-hand_1 | 123 | 149 | 1.9e-36 | 120.5 | 4.6e-11 | 2.7e-08 | 32.5 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 4 | EF-hand_6 | 124 | 149 | 1.1e-28 | 96.4 | 7.2e-06 | 0.0043 | 16.8 |
| pfu_aug2.0_3349.1_32453.t1 | 4 | 4 | EF-hand_5 | 128 | 148 | 2.6e-17 | 61.2 | 3.6e-06 | 0.0022 | 17.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3349.1_32453.t1 | gi|12851157|dbj|BAB28959.1| | unnamed protein product [Mus musculus] | 0.0 |
| pfu_aug2.0_3349.1_32453.t1 | gi|469422|gb|AAA66182.1| | calmodulin [Mus musculus] | 0.0 |
| pfu_aug2.0_3349.1_32453.t1 | gi|558173244|ref|XP_006125555.1| | PREDICTED: calmodulin-like isoform X2 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3349.1_32453.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3349.1_32453.t1 atggcggatgacttggatctgtctgaagagcagatagcagaactaagagaggcgttcagtctgtttgacaaagatggtga cgagacgatcacgacaaaagaattgggtacagtcatgcggtccctgggtcagaaccccacggaggcagaaatacaggaga tgatccaggaggtggatcaagacggaaacggtacaatagattttgatgagttcctacagatgatggccaagaagatgaaa gacagtgactcagaagaggagatgaagcaagcttttaaggtgtttgattgggacaatactggatgtataactgctgagaa cttacgtgttgtgatgacgaaccttggtgagaagatgacggatgaggagatagatgaaatggtccgactggcagatgtga atggcgatggatctgttaattatgatgaatttctcgccatgatgaccggggcagttcagtga |
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Protein
| Protein ID | pfu_aug2.0_3349.1_32453.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3349.1_32453.t1 MADDLDLSEEQIAELREAFSLFDKDGDETITTKELGTVMRSLGQNPTEAEIQEMIQEVDQDGNGTIDFDEFLQMMAKKMK DSDSEEEMKQAFKVFDWDNTGCITAENLRVVMTNLGEKMTDEEIDEMVRLADVNGDGSVNYDEFLAMMTGAVQ |
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