Gene
| Gene Model ID | pfu_aug2.0_3247.1_25693 |
|---|---|
| Locus | scaffold3247.1 : 46475 ... 57875 : - |
| To GenomeBrowser | scaffold3247.1:46475..57875 |
| Genes list of scaffold | scaffold3247.1 |
| Synonym | pfu_aug1.0_11519.1_46391 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| non-symbiotic hemoglobin 1-like | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3247.1_25693.t1 | 1 | 1 | Globin | 29 | 137 | 4.6e-19 | 68.8 | 4.1e-23 | 6.1e-19 | 68.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3247.1_25693.t1 | gi|585704400|ref|XP_006823444.1| | PREDICTED: neuroglobin-1-like [Saccoglossus kowalevskii] | 3.0e-39 |
| pfu_aug2.0_3247.1_25693.t1 | gi|585671562|ref|XP_006818069.1| | PREDICTED: non-symbiotic hemoglobin 1-like [Saccoglossus kowalevskii] | 7.0e-35 |
| pfu_aug2.0_3247.1_25693.t1 | gi|585695416|ref|XP_006822018.1| | PREDICTED: globin-1-like [Saccoglossus kowalevskii] | 1.0e-31 |
| pfu_aug2.0_3247.1_25693.t1 | gi|675861620|ref|XP_009016370.1| | hypothetical protein HELRODRAFT_171404 [Helobdella robusta] | 3.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_3247.1_25693.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3247.1_25693.t1 atgatgggctgtgacgtcagtaaatcagttgacgtcatggagccacaacagtctgaatgtacgtccgcagaatttacaga cacacagatagacaccatacgaagcacatggccattgttatctgcagacatgacagacatcggcggcaaggtcttccttc gaacattttatgaggaaccaagaaccaaagatgtgttccctcaatttagcgatttggaggactttgaaatcgcaaagcat cctttcttcaagggacacgtagcaaaattcatgcaagttgtagatgctgtcgttgataatctagatggccctaaggcgag tatacaacaactcttgttgatgttaggagcacgacacgcaaccttccaaggcttccatttggaatattttgatgtattta ccaaagtcctaattgatgtatgggaaacggaaataggcgaagaattcataccggaagtaaaggagtgctgggtatttgtg tttgcgtacattgtcaagtacctgagacaaggttattttctgtatgttaacgaatgtacggacgatgtgatagaggaaaa atcataa |
|
Protein
| Protein ID | pfu_aug2.0_3247.1_25693.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3247.1_25693.t1 MMGCDVSKSVDVMEPQQSECTSAEFTDTQIDTIRSTWPLLSADMTDIGGKVFLRTFYEEPRTKDVFPQFSDLEDFEIAKH PFFKGHVAKFMQVVDAVVDNLDGPKASIQQLLLMLGARHATFQGFHLEYFDVFTKVLIDVWETEIGEEFIPEVKECWVFV FAYIVKYLRQGYFLYVNECTDDVIEEKS |
|