Gene
| Gene Model ID | pfu_aug2.0_3240.1_02364 |
|---|---|
| Locus | scaffold3240.1 : 36606 ... 51720 : + |
| To GenomeBrowser | scaffold3240.1:36606..51720 |
| Genes list of scaffold | scaffold3240.1 |
| Synonym | pfu_aug1.0_5913.1_59886 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| kinesin-like protein kif16b | GO:0001704 GO:0005737 GO:0005856 GO:0006895 GO:0007492 GO:0008543 GO:0017111 GO:0017137 GO:1901981 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3240.1_02364.t1 | 3 | 1 | Kinesin | 53 | 83 | 0.0 | 208.6 | 0.02 | 150.0 | 0.9 |
| pfu_aug2.0_3240.1_02364.t1 | 3 | 2 | Kinesin | 90 | 119 | 0.0 | 208.6 | 1.1e-05 | 0.081 | 11.6 |
| pfu_aug2.0_3240.1_02364.t1 | 3 | 3 | Kinesin | 119 | 264 | 0.0 | 208.6 | 0.0 | 0.0 | 194.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3240.1_02364.t1 | gi|148696475|gb|EDL28422.1| | mCG129350, isoform CRA_b [Mus musculus] | 0.0 |
| pfu_aug2.0_3240.1_02364.t1 | gi|149041260|gb|EDL95193.1| | kinesin family member 16B (predicted), isoform CRA_b [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_3240.1_02364.t1 | gi|148696474|gb|EDL28421.1| | mCG129350, isoform CRA_a [Mus musculus] | 0.0 |
| pfu_aug2.0_3240.1_02364.t1 | gi|149041259|gb|EDL95192.1| | kinesin family member 16B (predicted), isoform CRA_a [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_3240.1_02364.t1 | gi|513174215|ref|XP_004940227.1| | PREDICTED: kinesin family member 16B isoform X19 [Gallus gallus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3240.1_02364.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3240.1_02364.t1 atgcaacacccgtcgcaacagttccatcggagacttggtaaaattcgtttactgtctcgatgtattgatgtacgtatcag agaagatggactgggcagcaagtttatcatccagatggatggaaagaagaccaccatcactaaccttaagataccagagt ctatgcatgagggtgatactgcaagagaagcaatgcgacagaaagattttacttttgatttctccttctggtcagtgttg aaaacagacccaaaatatgcctcccaggaaaaggatgacccaggtcttattcccaggatctgtaaagaactcttctccaa gatgtctgatgaggaaacaaactacaggactgaagtcaggactacagcagcgactaacatgaatgatgtcagcagtagat ctcatgccatcttcaccattgttttcactcaggccaagtttacagatgatatgccttgtgagaccagcagtaagattcac cttgtggacttggcaggcagtgaaagagctgatgcttcaggtgccacagggcagaggctaaaagagggagctagtataaa caagtctctggttacactaggaactgtaatatctgtactagctgaggcatcaggtaaccgaccagggaagaattcattta tcccgtaccgtgattctgtacttacttggttactgaaggacagcctgggtggtaattccagaaccattatgatcgcaacc atttcaccggctgatgtaaactatgcagagacactaagtacactgaggtatgctaacagggctaagaacatcatcaacag gcctacagttaatgaggatcccaatgtgaagcttatcagagagctgagggaggagatagctagacttaaggcaatgcttg gtgggaatatagataacatttcaactccaaaggttcaagagaaactacatgaaaatgaagcaagggtgaaagttttgacg caggaatgggcagggaaatggaatgagacagagcacattttgaaggatccttctctagcattgaggaaagaaggacttgg tgtagtattagactccaatctaccacacctgattggtatagatgatgacatactcagtacaggaatcatgctctatcatc tcaaagaaggaaagacaactgtggggagaacagatgctgatattccacctgacattgtgatctcaggacttgacacagag gaagagcattgtgtgatagagtacagtaatggggaggtaactctgtatcccatacaaagttctctgtgtgtcatcaatgg agccactgtaatacatcctaccaaacttacacaagagtacagtaatggggaggtaactctgtatcccatgcaaagctttc tgtgtgtcaccaatagggccactgttaaacatcctaccaaacttacacaaggtcagttaaagacagaacagtgttcattc aatgttcactctacaactatgtgtacttgcttactttcatgtacttgtacttccctatcctctagaacataa |
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Protein
| Protein ID | pfu_aug2.0_3240.1_02364.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3240.1_02364.t1 MQHPSQQFHRRLGKIRLLSRCIDVRIREDGLGSKFIIQMDGKKTTITNLKIPESMHEGDTAREAMRQKDFTFDFSFWSVL KTDPKYASQEKDDPGLIPRICKELFSKMSDEETNYRTEVRTTAATNMNDVSSRSHAIFTIVFTQAKFTDDMPCETSSKIH LVDLAGSERADASGATGQRLKEGASINKSLVTLGTVISVLAEASGNRPGKNSFIPYRDSVLTWLLKDSLGGNSRTIMIAT ISPADVNYAETLSTLRYANRAKNIINRPTVNEDPNVKLIRELREEIARLKAMLGGNIDNISTPKVQEKLHENEARVKVLT QEWAGKWNETEHILKDPSLALRKEGLGVVLDSNLPHLIGIDDDILSTGIMLYHLKEGKTTVGRTDADIPPDIVISGLDTE EEHCVIEYSNGEVTLYPIQSSLCVINGATVIHPTKLTQEYSNGEVTLYPMQSFLCVTNRATVKHPTKLTQGQLKTEQCSF NVHSTTMCTCLLSCTCTSLSSRT |
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