Gene
| Gene Model ID | pfu_aug2.0_324.1_13995 |
|---|---|
| Locus | scaffold324.1 : 168130 ... 191186 : + |
| To GenomeBrowser | scaffold324.1:168130..191186 |
| Genes list of scaffold | scaffold324.1 |
| Synonym | pfu_aug1.0_6425.1_31199 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_324.1_13995.t1 | 6 | 1 | BING4CT | 328 | 349 | 0.0 | 239.7 | 0.4 | 1500.0 | -1.3 |
| pfu_aug2.0_324.1_13995.t1 | 5 | 1 | WD40 | 331 | 343 | 5.3e-08 | 32.4 | 1.7 | 6400.0 | -2.7 |
| pfu_aug2.0_324.1_13995.t1 | 6 | 2 | BING4CT | 377 | 396 | 0.0 | 239.7 | 1.3 | 4800.0 | -2.9 |
| pfu_aug2.0_324.1_13995.t1 | 6 | 3 | BING4CT | 502 | 523 | 0.0 | 239.7 | 0.4 | 1500.0 | -1.3 |
| pfu_aug2.0_324.1_13995.t1 | 5 | 2 | WD40 | 505 | 517 | 5.3e-08 | 32.4 | 1.7 | 6400.0 | -2.7 |
| pfu_aug2.0_324.1_13995.t1 | 6 | 4 | BING4CT | 551 | 570 | 0.0 | 239.7 | 1.3 | 4800.0 | -2.9 |
| pfu_aug2.0_324.1_13995.t1 | 5 | 3 | WD40 | 572 | 609 | 5.3e-08 | 32.4 | 1.0e-09 | 3.8e-06 | 26.5 |
| pfu_aug2.0_324.1_13995.t1 | 6 | 5 | BING4CT | 658 | 735 | 0.0 | 239.7 | 6.4e-38 | 2.4e-34 | 116.6 |
| pfu_aug2.0_324.1_13995.t1 | 5 | 4 | WD40 | 665 | 678 | 5.3e-08 | 32.4 | 0.73 | 2700.0 | -1.6 |
| pfu_aug2.0_324.1_13995.t1 | 6 | 6 | BING4CT | 835 | 912 | 0.0 | 239.7 | 5.0e-38 | 1.9e-34 | 117.0 |
| pfu_aug2.0_324.1_13995.t1 | 5 | 5 | WD40 | 842 | 854 | 5.3e-08 | 32.4 | 0.9 | 3300.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_324.1_13995.t1 | gi|675866780|ref|XP_009018950.1| | hypothetical protein HELRODRAFT_81152, partial [Helobdella robusta] | 0.0 |
| pfu_aug2.0_324.1_13995.t1 | gi|676427000|ref|XP_009044805.1| | hypothetical protein LOTGIDRAFT_223849 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_324.1_13995.t1 | gi|498965284|ref|XP_004546170.1| | PREDICTED: WD repeat-containing protein 46 isoform X2 [Maylandia zebra] | 0.0 |
| pfu_aug2.0_324.1_13995.t1 | gi|498965279|ref|XP_004546169.1| | PREDICTED: WD repeat-containing protein 46 isoform X1 [Maylandia zebra] | 0.0 |
| pfu_aug2.0_324.1_13995.t1 | gi|556993810|ref|XP_006001024.1| | PREDICTED: WD repeat-containing protein 46-like [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_324.1_13995.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13995.t1 atgaacagaaaggctaggtatttcaacccttcagaagactcaaaggacaataattcaattttaccagacaaaaggattgg ttcacaaaaaacagagaataattcacatgtagaaaatgtaggatcgtctagtccaggtgatggaatacgtgacaggatgc agaaatggaaagagaggaagaaaaaaggagctaaatttccatcaaatgactcggataaaagtgctattagagagaacttt ggagcggacaaaatcagcttcagtgaagaacctcatcactctaaagtatatggtcaagcaatctccaagaggactagatt aaaaatgctgaaaaatataaatgctagcaaaaggaagagtcagaagaatgctacaaaggatatacaagagcctgtgatac agaaatatggagcaacaaacaaaagcagagacccttttcctggtgatgcacctgtgtccaaaaaagctgtgaagaaatat aaacgggggaagaaacttgatgtgaaaggaatgaaaactagttttgccagaaaaaagtttttagaaaaagaaaaaaagat gcagtttgcattcaagcaggcagcgagaagcgaaaacttaatgaatgaagatgctgggtttgttcaagcagaagaaggag aagatacaactttacttacacaacatgacattgttaaagctgtggacattactagtgctcaaaagtacttcgatttagat ttgaaagactttggaccatacagagttaattacacaagaaatgggaggtttcttctcattggtggaaatagaggtcatgt ggcatccatagactggcagtcaaagcgtctgatgtgtgaaatgaatgtcatggaaaccacacatgatgtcaaatggctac atcaggagacaatgtttgctgcggctcagaagcagtggacgtacatatatgataaccagggtatagagctgcactgtttg aagaccctggattgtgcactgagactggagtttctaccctttcatttcctcctggcctctgctagctccaagggttttct gtcttggttagatgtttccattggcaagcaagtggccgtccataaaacaggtcaaggtcgtttagatgtcatgtgccaaa acccacagaatgccaccttatgtctcggtcatactggaggaacagtaactctttggtcacctaatgtcaaagaaccttta gtgaagatgttatgtcacgggggcgggtacttcgatttagatttgaaagactttggaccatacagagttaactattcaaa gaatgggaggtttcttctcattggtggaaatagaggtcatgtggcttccatagactggcagtcaaagcgtctgatgtgtg aaatgaacgtcatggaaaccacacatgatgtcaaatggctgcatcaggagacaatgtttgctgcggctcagaagcagtgg acgtacatatatgataaccagggtatagagctgcactgtttgaagaccttggattgtgcactgagactggagtttcttcc ctttcacttcctcctggcctctgctagctccaagggttttctgtcttggttagatgtttccattggcaagcaagtggcag tccataaaacaggtcaaggtcgtttagatgtcatgtgccaaaacccacagaatgccaccttatgtctcggtcatactgga ggaacagtaactctgtggtcacctaacgtcaaagaaccattagtgaagatgttatgtcatgggggtggggtgagatcagt gacagtggatagggcaggacagtatttggccacatcgggccttgacaggaagttaaagatatgggatctgaggacgtata agatgttacaatgttataagacaggttatggtgctggtagcatggccttctcacaaacaggactacttgcattaggcaaa ggaaatctagtggaggtgtaccaggactgctgcagacaaacagtaactaagccgtacctaacacacaagttcacatccac agtggaggcactacagttttgtccgtatgaggatgtcctaggtgtggggcatggggagggattcactagtctacttatac ctggtgctggagaagccaactttgatgccttagaggacaatccataccagagtaagaaacagagacgggaggctgaagta cagatgctccttaacaaaattccgtttgagatgattcacgtggatacagctaagataggacaacttgacatgaagacgta cgaggagaaaatacagcagcataacaaaatacattttctgaagcctaagaaagttcattttgagccatcatataaaatga aaggaaagaataagtcaggaagaatagagaatagaaagaaggctgtacaagaggaagagaaaaggaatgtgattaaggaa gtgaatagactcaaacaaagagagatggctgccaaatataaaacaaaggagcttaaatcagacaatgtgtaccaggattg ctgcagacaaacagtaactaagccgtacctaacacacaagttgacatccacagtggaggcactacagttttgtccgtatg aggatgtcctaggtgttgggcatggagagggattcactagtctacttatacctggtgctggagaagccaactttgatgcc ttagaggacaatccataccagagtaagaaacagagacgggaagctgaagtacagatgctcctcaataaaattccgtttga gatgattcacgtggatacagctaagataggacaacttgacgtgaagacgtacgaggagaaaatacagcagcataacaaga tacattttctgaagcctaagaaagttcactttgagccatcatataaaatgaaaggaaagaataaatcaggtagaatagag aatagaaagaaggccgtacaagaagaagagaaacggaatgtgataaaggaagtgaataaactcaaacaaagagagatggc tgccaagtataaaacaaaggaactcaaatcagacaatgtcttagatagatttaagaaaaaagattttaattaa |
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Protein
| Protein ID | pfu_aug2.0_324.1_13995.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13995.t1 MNRKARYFNPSEDSKDNNSILPDKRIGSQKTENNSHVENVGSSSPGDGIRDRMQKWKERKKKGAKFPSNDSDKSAIRENF GADKISFSEEPHHSKVYGQAISKRTRLKMLKNINASKRKSQKNATKDIQEPVIQKYGATNKSRDPFPGDAPVSKKAVKKY KRGKKLDVKGMKTSFARKKFLEKEKKMQFAFKQAARSENLMNEDAGFVQAEEGEDTTLLTQHDIVKAVDITSAQKYFDLD LKDFGPYRVNYTRNGRFLLIGGNRGHVASIDWQSKRLMCEMNVMETTHDVKWLHQETMFAAAQKQWTYIYDNQGIELHCL KTLDCALRLEFLPFHFLLASASSKGFLSWLDVSIGKQVAVHKTGQGRLDVMCQNPQNATLCLGHTGGTVTLWSPNVKEPL VKMLCHGGGYFDLDLKDFGPYRVNYSKNGRFLLIGGNRGHVASIDWQSKRLMCEMNVMETTHDVKWLHQETMFAAAQKQW TYIYDNQGIELHCLKTLDCALRLEFLPFHFLLASASSKGFLSWLDVSIGKQVAVHKTGQGRLDVMCQNPQNATLCLGHTG GTVTLWSPNVKEPLVKMLCHGGGVRSVTVDRAGQYLATSGLDRKLKIWDLRTYKMLQCYKTGYGAGSMAFSQTGLLALGK GNLVEVYQDCCRQTVTKPYLTHKFTSTVEALQFCPYEDVLGVGHGEGFTSLLIPGAGEANFDALEDNPYQSKKQRREAEV QMLLNKIPFEMIHVDTAKIGQLDMKTYEEKIQQHNKIHFLKPKKVHFEPSYKMKGKNKSGRIENRKKAVQEEEKRNVIKE VNRLKQREMAAKYKTKELKSDNVYQDCCRQTVTKPYLTHKLTSTVEALQFCPYEDVLGVGHGEGFTSLLIPGAGEANFDA LEDNPYQSKKQRREAEVQMLLNKIPFEMIHVDTAKIGQLDVKTYEEKIQQHNKIHFLKPKKVHFEPSYKMKGKNKSGRIE NRKKAVQEEEKRNVIKEVNKLKQREMAAKYKTKELKSDNVLDRFKKKDFN |
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