Gene
| Gene Model ID | pfu_aug2.0_324.1_13993 |
|---|---|
| Locus | scaffold324.1 : 144176 ... 146979 : + |
| To GenomeBrowser | scaffold324.1:144176..146979 |
| Genes list of scaffold | scaffold324.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_324.1_13993.t1 | 2 | 1 | zf-C3HC4_3 | 115 | 125 | 7.1e-13 | 48.0 | 3.9 | 6500.0 | -3.1 |
| pfu_aug2.0_324.1_13993.t1 | 2 | 2 | zf-C3HC4_3 | 145 | 190 | 7.1e-13 | 48.0 | 4.3e-16 | 7.1e-13 | 48.0 |
| pfu_aug2.0_324.1_13993.t1 | 1 | 1 | zf-C3HC4_2 | 146 | 184 | 6.4e-09 | 35.7 | 8.6e-12 | 1.4e-08 | 34.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_324.1_13993.t1 | gi|302844474|ref|XP_002953777.1| | hypothetical protein VOLCADRAFT_94594 [Volvox carteri f. nagariensis] | 2.0e-07 |
| pfu_aug2.0_324.1_13993.t1 | gi|551629839|ref|XP_005817909.1| | hypothetical protein GUITHDRAFT_98881 [Guillardia theta CCMP2712] | 1.0e-06 |
| pfu_aug2.0_324.1_13993.t1 | gi|557766210|ref|XP_005182801.1| | PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Musca domestica] | 2.0e-06 |
| pfu_aug2.0_324.1_13993.t1 | gi|290987192|ref|XP_002676307.1| | predicted protein [Naegleria gruberi] | 2.0e-06 |
| pfu_aug2.0_324.1_13993.t1 | gi|676386683|ref|XP_009036620.1| | hypothetical protein AURANDRAFT_64011 [Aureococcus anophagefferens] | 3.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_324.1_13993.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13993.t1 atgaacaggataggaactacggatagatcacatgatgatgattctgttgaagagcaaaataatcaaaatgcaagaagaga gacagatcagcaagagaggagggaaatacttgaaaatgaagagaatgaaaacgaagaaaacagcaatgaagaagcagaaa ttaatcttgcagttgatgataatgacagaaacagaatacgtgaaatagaggcacaaaatgccagacaacagaacaacaat attaatcaacatcttcacagaagacgtaaccaattatttgtccgcttaccaaatcaacgtgagagacagacaagtgaaag cgacactgaatctgatgaaaattgcatgcttcaccaaagaaatctagtcttactacgtagaaatcaaaatatgagactgc agcacagacatacacagaggcaaaattgttacacttgtattgtttgtatggaacgtgaacgtaacattgcagtttttcct tgtggacacatgcaattatgtgcactgtgctttgataatattatgagaaataattctttatgtcctgtttgccaaaatca tatagatgaaagtagaaaagtttacttgtaa |
|
Protein
| Protein ID | pfu_aug2.0_324.1_13993.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_324.1_13993.t1 MNRIGTTDRSHDDDSVEEQNNQNARRETDQQERREILENEENENEENSNEEAEINLAVDDNDRNRIREIEAQNARQQNNN INQHLHRRRNQLFVRLPNQRERQTSESDTESDENCMLHQRNLVLLRRNQNMRLQHRHTQRQNCYTCIVCMERERNIAVFP CGHMQLCALCFDNIMRNNSLCPVCQNHIDESRKVYL |
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