Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_32.1_06787
Locus scaffold32.1 : 257784 ... 264291 : -
To GenomeBrowser scaffold32.1:257784..264291
Genes list of scaffold scaffold32.1
Synonym NA

Manual annotation
Annotation by Blast2GO
Annotation GO
phosphatidylethanolamine n-methyltransferase GO:0008152 GO:0008170

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_32.1_06787.t1 2 1 PEMT 74 85 2.6e-30 104.6 0.79 12000.0 -3.6
pfu_aug2.0_32.1_06787.t1 2 2 PEMT 109 210 2.6e-30 104.6 1.8e-34 2.6e-30 104.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_32.1_06787.t1 gi|658906910|ref|XP_008436184.1| PREDICTED: phosphatidylethanolamine N-methyltransferase isoform X1 [Poecilia reticulata] 0.0
pfu_aug2.0_32.1_06787.t1 gi|551511789|ref|XP_005807412.1| PREDICTED: phosphatidylethanolamine N-methyltransferase-like [Xiphophorus maculatus] 0.0
pfu_aug2.0_32.1_06787.t1 gi|734597399|ref|XP_010741995.1| PREDICTED: phosphatidylethanolamine N-methyltransferase [Larimichthys crocea] 0.0
pfu_aug2.0_32.1_06787.t1 gi|55742284|ref|NP_001006845.1| phosphatidylethanolamine N-methyltransferase [Xenopus (Silurana) tropicalis] 0.0
pfu_aug2.0_32.1_06787.t1 gi|657578915|ref|XP_008293352.1| PREDICTED: phosphatidylethanolamine N-methyltransferase [Stegastes partitus] 0.0

Transcript
Transcript IDpfu_aug2.0_32.1_06787.t1
Definition-
>pfu_aug2.0_32.1_06787.t1
atgaaccgtctatcctgggaatgctgtgatttttcagctttggtagattttacaaagatggaagctccctttttgtacct
tcagttcagtgacgtcaatctatggatttcactggcaacaatagtttttaatccactattttggaatactgttgctagat
gggagtataggagtggaaccataactaaaatactagggtctccatacagaggctgtatattactgggtctcatcattcta
ggactgggcgtggttagagattggcaattcaagctagccatggatagccagcccacgtggccattgttatatgaaaactg
gattttatattttggatatggacttattatattaggatctactttagtattttcaagttattttgctttgggattttatg
gtacttttctaggagattattttggaattctcatggaagagaaggtaacagggtttccgtttagtgttttagacaatccc
atgtactggggttccacatgtaatttcctaggatcagcactggtaaaagccagccaagcagggattttgctgtctgcagt
tgttgccttatgttatagaatagcgatatcttttgagggaccattcacctcgtacatatacagtcataaagaatacaaaa
gaaaatga

Protein
Protein IDpfu_aug2.0_32.1_06787.t1
Definition-
>pfu_aug2.0_32.1_06787.t1
MNRLSWECCDFSALVDFTKMEAPFLYLQFSDVNLWISLATIVFNPLFWNTVARWEYRSGTITKILGSPYRGCILLGLIIL
GLGVVRDWQFKLAMDSQPTWPLLYENWILYFGYGLIILGSTLVFSSYFALGFYGTFLGDYFGILMEEKVTGFPFSVLDNP
MYWGSTCNFLGSALVKASQAGILLSAVVALCYRIAISFEGPFTSYIYSHKEYKRK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495