Gene
| Gene Model ID | pfu_aug2.0_32.1_06775 |
|---|---|
| Locus | scaffold32.1 : 13123 ... 15115 : - |
| To GenomeBrowser | scaffold32.1:13123..15115 |
| Genes list of scaffold | scaffold32.1 |
| Synonym | pfu_aug1.0_4987.1_23702 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| activating transcription factor 7-interacting protein 1 isoform x3 | GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_32.1_06775.t1 | 2 | 1 | DUF3504 | 24 | 51 | 3.7e-13 | 49.6 | 0.28 | 1400.0 | -1.1 |
| pfu_aug2.0_32.1_06775.t1 | 2 | 2 | DUF3504 | 124 | 258 | 3.7e-13 | 49.6 | 1.9e-16 | 9.5e-13 | 48.2 |
| pfu_aug2.0_32.1_06775.t1 | 1 | 1 | Phage_integrase | 205 | 307 | 4.4e-09 | 36.2 | 1.4e-12 | 7.1e-09 | 35.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_32.1_06775.t1 | gi|704168873|ref|XP_010131012.1| | PREDICTED: activating transcription factor 7-interacting protein 1-like [Buceros rhinoceros silvestris] | 3.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_32.1_06775.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_32.1_06775.t1 atggaggtatatggtcaaactgcagatttgaccattataacaccggaggatctggcatctaaattaaggaagttttatgc cgaggttcgtccaaagccaaaggaaaaatcccaagatccttatgatgaatccagggagtatcacaaaaatagccttgtta atattcgatcagctattaatcgatacttagccgatatcaaacgacatattgatgtcacaaaagacaaagagttcaaaact gctaatggcgtgttagacggaatgctgaaggaacgtgcccgtcaagacaaagcaaaaccaaccaagcaccatgaagtgat ggaagtgcatgatcttacaaaaatctcagagtacctcaagcaagctcctcattgtcccatcattttgcgacaaaatgtgt ggtacaatcttgcaattcattttgtgatgcgagggatggaatttcaccataaacttcgcattgattcttttgaattccat actaacgagactggtgaatatgttaccataaaatctgcaccgagtcaaaaaaactaccagggtggaataaactctgatga ggcaccaaatgatcgacggatgtatgcttctggtactgagagctgtcccgtcaaaatgctcaggttattcttacagaaat gcgaccctggatccacatcactctttaatcagtacaagaattctgctgtcttacgtccaacacaggaaactatcttgtat actcccaagtcactggctaagcgcactttcagcaatttccttcccgacatatgtaaagccgctaaagtatccaagcaata catgccccactgcctccgcaccacagcaatccaggcactgaatgacgatggtttcgaggcaagacacatcatgtacatgt ctggccacaagaatgaaggctcgttgagatcgtacaatcgcaggttatctaccgtacaaaagaaatccctcacaaagtcg ttgtcatcagtagccctgcctgtagaggagcagcaaattgtagccgttttacctaattcgtctgatacagacctgtctgt cgcctgcgaaaatccctcgtgtgtctcggtaccaaacaactgcgaaaatgcaacttcctcaaccttctccgtcagtaaca tgccatataactttgctcctagcttagaacagcatcaaaccagtaatatggcaagacttggaccatatttctccaatgtt accttcaataaaagtaatttccacttctaa |
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Protein
| Protein ID | pfu_aug2.0_32.1_06775.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_32.1_06775.t1 MEVYGQTADLTIITPEDLASKLRKFYAEVRPKPKEKSQDPYDESREYHKNSLVNIRSAINRYLADIKRHIDVTKDKEFKT ANGVLDGMLKERARQDKAKPTKHHEVMEVHDLTKISEYLKQAPHCPIILRQNVWYNLAIHFVMRGMEFHHKLRIDSFEFH TNETGEYVTIKSAPSQKNYQGGINSDEAPNDRRMYASGTESCPVKMLRLFLQKCDPGSTSLFNQYKNSAVLRPTQETILY TPKSLAKRTFSNFLPDICKAAKVSKQYMPHCLRTTAIQALNDDGFEARHIMYMSGHKNEGSLRSYNRRLSTVQKKSLTKS LSSVALPVEEQQIVAVLPNSSDTDLSVACENPSCVSVPNNCENATSSTFSVSNMPYNFAPSLEQHQTSNMARLGPYFSNV TFNKSNFHF |
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