Gene
| Gene Model ID | pfu_aug2.0_3176.1_22309 |
|---|---|
| Locus | scaffold3176.1 : 49896 ... 60216 : + |
| To GenomeBrowser | scaffold3176.1:49896..60216 |
| Genes list of scaffold | scaffold3176.1 |
| Synonym | pfu_aug1.0_16193.1_32653 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial import inner membrane translocase subunit tim44-like | GO:0005515 GO:0005743 GO:0006886 GO:0071806 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3176.1_22309.t1 | 2 | 1 | Tim44 | 29 | 57 | 1.8e-34 | 118.8 | 0.56 | 1400.0 | -0.9 |
| pfu_aug2.0_3176.1_22309.t1 | 2 | 2 | Tim44 | 194 | 341 | 1.8e-34 | 118.8 | 3.2e-37 | 7.9e-34 | 116.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3176.1_22309.t1 | gi|524871066|ref|XP_005092309.1| | PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_3176.1_22309.t1 | gi|675867562|ref|XP_009019341.1| | hypothetical protein HELRODRAFT_66185 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_3176.1_22309.t1 | gi|115633997|ref|XP_001177162.1| | PREDICTED: mitochondrial import inner membrane translocase subunit TIM44 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_3176.1_22309.t1 | gi|291241124|ref|XP_002740467.1| | PREDICTED: mitochondrial import inner membrane translocase subunit TIM44-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_3176.1_22309.t1 | gi|241834608|ref|XP_002415012.1| | mitochondrial import inner membrane translocase, subunit TIM44, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_3176.1_22309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3176.1_22309.t1 atgtcaggagggcagagaaattttctgaaacagctggtatcaaatctaaaggagggattaagtcaaagcaaggaaatgga ggagagccttaagaaattcagggaggaaaaagacaaactggagcagtcagatgccttaaagaaagctcgacagaaatttg aaaatattgagaaggagagactacatagatctgaggccctgaagaagacatacgaagatgtgaaagataaagtttcacag ggagttaaagtcgttaaagatgaagtagaggaggcaactacaaggtcaaggtcatacaaagccccagaggaattacacaa acgatcagattatgcattgctaatgaaggatacaaaaccaatagaagaaaacttagatgccactggtgtagtgattcaca aagactccaaatggtatcagagctggcagaattttaaggacaataaccaatatataaataaattatttgatttaaagatg agatacgacgaaagtgagaatattatggttagatttactaggacattcacggataaaataggaagagtttttggtaatgt tttctcaaagacggagatgtctgaagtattaacagagatatctaaagtggatcccacctttaacatagaggagtttttag cttatgtggaacgtataatgattcctaatgtcctagagtctattatgagagcagagcttgacatcttaaaggactggtgt catgaggggccatacaatgccttgtctgtgccattgaaagaggctgtcaaacagaggtatacccccaactctagggtatt ggatgtcagccatgtagatatagtgggtggcaagatgatggaacaaggtccggttctgctcctgacatttaatgcccagc agatagaggcctggaaggacttctctgggaaggtcgtggtaggagatgctgagaaggttcaaagaattacatatgtatgg gcattgtgtcgagatcaggaagatttagaccctaaagctgcatggaaactgatggacattagtgccagtgcacaagaaca gtggttatag |
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Protein
| Protein ID | pfu_aug2.0_3176.1_22309.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3176.1_22309.t1 MSGGQRNFLKQLVSNLKEGLSQSKEMEESLKKFREEKDKLEQSDALKKARQKFENIEKERLHRSEALKKTYEDVKDKVSQ GVKVVKDEVEEATTRSRSYKAPEELHKRSDYALLMKDTKPIEENLDATGVVIHKDSKWYQSWQNFKDNNQYINKLFDLKM RYDESENIMVRFTRTFTDKIGRVFGNVFSKTEMSEVLTEISKVDPTFNIEEFLAYVERIMIPNVLESIMRAELDILKDWC HEGPYNALSVPLKEAVKQRYTPNSRVLDVSHVDIVGGKMMEQGPVLLLTFNAQQIEAWKDFSGKVVVGDAEKVQRITYVW ALCRDQEDLDPKAAWKLMDISASAQEQWL |
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