Gene
| Gene Model ID | pfu_aug2.0_3176.1_22308 |
|---|---|
| Locus | scaffold3176.1 : 38077 ... 45575 : - |
| To GenomeBrowser | scaffold3176.1:38077..45575 |
| Genes list of scaffold | scaffold3176.1 |
| Synonym | pfu_aug1.0_5528.1_09130 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3176.1_22308.t1 | 1 | 1 | Glyoxalase | 25 | 102 | 4.8e-09 | 36.2 | 1.5e-12 | 5.4e-09 | 36.0 |
| pfu_aug2.0_3176.1_22308.t1 | 1 | 1 | Glyoxalase_4 | 27 | 107 | 4.1e-13 | 49.2 | 1.3e-16 | 4.8e-13 | 49.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3176.1_22308.t1 | gi|556950937|ref|XP_005987806.1| | PREDICTED: methylmalonyl-CoA epimerase, mitochondrial [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_3176.1_22308.t1 | gi|658841944|ref|XP_008403361.1| | PREDICTED: methylmalonyl-CoA epimerase, mitochondrial [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_3176.1_22308.t1 | gi|617406190|ref|XP_007553941.1| | PREDICTED: methylmalonyl-CoA epimerase, mitochondrial [Poecilia formosa] | 0.0 |
| pfu_aug2.0_3176.1_22308.t1 | gi|432851804|ref|XP_004067093.1| | PREDICTED: methylmalonyl-CoA epimerase, mitochondrial isoform X1 [Oryzias latipes] | 0.0 |
| pfu_aug2.0_3176.1_22308.t1 | gi|597738634|ref|XP_007231528.1| | PREDICTED: methylmalonyl-CoA epimerase, mitochondrial-like [Astyanax mexicanus] | 1.4013e-45 |
Transcript
| Transcript ID | pfu_aug2.0_3176.1_22308.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3176.1_22308.t1 atgctgactggaagggttctgaatgccagaaatctacatttgagtcattcagtaaagaaatggagcatagggaagttaaa tcatgttgccatggcatgtcctgatattgacaaggctacagctttatatagggatgtactgggagccaaagttagtgaaa aacatcctcaaccagagcatggggtatacactgtatttgtagaacttggtgaaacaaaacttgaattactacacccatat ggagataaaagtcccatttctggctttttagagaaaaataaaagtggaggcatgcaccatatatgtatagagattaaaga aatatag |
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Protein
| Protein ID | pfu_aug2.0_3176.1_22308.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3176.1_22308.t1 MLTGRVLNARNLHLSHSVKKWSIGKLNHVAMACPDIDKATALYRDVLGAKVSEKHPQPEHGVYTVFVELGETKLELLHPY GDKSPISGFLEKNKSGGMHHICIEIKEI |
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