Gene
| Gene Model ID | pfu_aug2.0_3176.1_22305 |
|---|---|
| Locus | scaffold3176.1 : 10504 ... 16675 : - |
| To GenomeBrowser | scaffold3176.1:10504..16675 |
| Genes list of scaffold | scaffold3176.1 |
| Synonym | pfu_aug1.0_1834.1_58663 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_3176.1_22305.t1 | 1 | 1 | SOUL | 31 | 167 | 3.9e-28 | 98.1 | 3.0e-32 | 4.5e-28 | 97.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_3176.1_22305.t1 | gi|340370236|ref|XP_003383652.1| | PREDICTED: heme-binding protein 2-like [Amphimedon queenslandica] | 8.0e-30 |
| pfu_aug2.0_3176.1_22305.t1 | gi|340370234|ref|XP_003383651.1| | PREDICTED: heme-binding protein 1-like [Amphimedon queenslandica] | 2.0e-27 |
| pfu_aug2.0_3176.1_22305.t1 | gi|302835169|ref|XP_002949146.1| | hypothetical protein VOLCADRAFT_89567 [Volvox carteri f. nagariensis] | 3.0e-27 |
| pfu_aug2.0_3176.1_22305.t1 | gi|390357074|ref|XP_003728923.1| | PREDICTED: heme-binding protein 2 [Strongylocentrotus purpuratus] | 5.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_3176.1_22305.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3176.1_22305.t1 atgtaccagcagttagtaatcctgagcctgtttgccttcgcctactcggcgtctgtcggtggaggatctgctccagcttt ctgtcatggtctagattgtcctgaatacacagtggctcgtacattctcgaaaggatatgaacttagaaactacaaaccgt ccaaatgggtagcaaccaacttgacagcaatggagttcactgatgacaacagacgagaaatgttttataagctgttttat tatatatcaggaaataactcagcacacatgaaaatcaatatgactgctccagtactgagggaagtttttcacggaccagg accaacctgtgagagtacctttatcacacactttatgattccttttggtctccaaaacgacgtcaaagcacccaccgatc cttcagtctacatccgagacatgccagcaatgagagtctatgtcagaaaatcagaaaccgaaggcatacaaaatcaggat aaaacaggaaccaaagcaaatgaacaaaaaattccaccacatgaaaagaagcgaactcccgatatggaagttataaatta ttcaattcattaa |
|
Protein
| Protein ID | pfu_aug2.0_3176.1_22305.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_3176.1_22305.t1 MYQQLVILSLFAFAYSASVGGGSAPAFCHGLDCPEYTVARTFSKGYELRNYKPSKWVATNLTAMEFTDDNRREMFYKLFY YISGNNSAHMKINMTAPVLREVFHGPGPTCESTFITHFMIPFGLQNDVKAPTDPSVYIRDMPAMRVYVRKSETEGIQNQD KTGTKANEQKIPPHEKKRTPDMEVINYSIH |
|