Gene
| Gene Model ID | pfu_aug2.0_2844.1_15646 |
|---|---|
| Locus | scaffold2844.1 : 62166 ... 76770 : + |
| To GenomeBrowser | scaffold2844.1:62166..76770 |
| Genes list of scaffold | scaffold2844.1 |
| Synonym | pfu_aug1.0_14616.1_54085 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cysteine mitochondrial | GO:0005654 GO:0005730 GO:0005759 GO:0005829 GO:0006534 GO:0006777 GO:0018283 GO:0030170 GO:0031071 GO:0042803 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2844.1_15646.t1 | 2 | 1 | Aminotran_5 | 67 | 194 | 0.0 | 249.4 | 2.6e-35 | 1.9e-31 | 109.1 |
| pfu_aug2.0_2844.1_15646.t1 | 2 | 2 | Aminotran_5 | 202 | 403 | 0.0 | 249.4 | 2.38221e-44 | 1.8e-40 | 138.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2844.1_15646.t1 | gi|676494490|ref|XP_009066580.1| | hypothetical protein LOTGIDRAFT_211436 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2844.1_15646.t1 | gi|556947545|ref|XP_005986781.1| | PREDICTED: cysteine desulfurase, mitochondrial [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_2844.1_15646.t1 | gi|76880449|ref|NP_445914.2| | cysteine desulfurase, mitochondrial [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_2844.1_15646.t1 | gi|58618884|gb|AAH89205.1| | Nfs1 protein [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_2844.1_15646.t1 | gi|532040528|ref|XP_005363114.1| | PREDICTED: cysteine desulfurase, mitochondrial isoform X1 [Microtus ochrogaster] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2844.1_15646.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2844.1_15646.t1 atggcgagtaaaatagcattaaacctccttaggaggtcggtttcaagaggatttattgtgtttaagtcggcaccaagaag gaatctacatagcagcaatgttgacagttcttctgcggctgccacagcagtgaaaccaaggacttcagagacaattgaga ctcgtaaagacatgcctgaccctgatgttagaccactctacatggacgcccaagctactacacctctggatccacgtgta ctggatgcaatgctgccatattttgttagtttctatgggaacccgcattcaaggacacatgcttatggatgggaaagtga agccgctgtagaaaaggctcgcaagcaaatagcgactttgttgggagcagaccctcgggaaatcatcttcaccagcggag ctacagagtcaaataatatcgcagtcaaaggcgttccacgattctacagagctaagaaaaaccatgtgataaccacacaa actgaacacaaatgtgtgctggactcctgccgtgtattggaggctgaagggttcaaggtcacatacctacccgtcaaaca aaatggattagtagacatgaaggttagtcatcatagacagagtgagctatgccgtagcaagaagatattcttccacactg acgctgctcaggccgtaggaaaaatccccatagacgttgacgatatgaagatagatctgatgtccatcagtggtcacaag atctatggacccaaaggtgttggagctctgtatgtaagaagaagaccaagggttagaatagaagctccccagagtggggg tggtcaggagaggggaatgagaagtggaacagtcccaacacccctctgtgttggattgggatctgcctgtgagctggcta tgaatgaaatggagtatgatcatcagagaatcaaagctttatcagaccgtctgatcaacaaaatcaatgctgagttaccc caggtgataaggaatggtgaccctgaacaaacctacccaggatgtgtgaatctttctttcgcgtttgttgagggagagag tttattaatggccctcaaagacatagctttatcttcaggaagtgcatgtacatctgcgtcccttgaaccatcatatgtgt taagagcaataggagcagaggaggatctggcacactcatcaataaggtttggtatagggaggttcaccacagaggaggaa gttgactacacagcacagaaatgtattgaacatgttacacggctcagagaaatgagcccactgtgggagatggtccagga aggtatagatctgaaatccatacagtggtcccagcactga |
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Protein
| Protein ID | pfu_aug2.0_2844.1_15646.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2844.1_15646.t1 MASKIALNLLRRSVSRGFIVFKSAPRRNLHSSNVDSSSAAATAVKPRTSETIETRKDMPDPDVRPLYMDAQATTPLDPRV LDAMLPYFVSFYGNPHSRTHAYGWESEAAVEKARKQIATLLGADPREIIFTSGATESNNIAVKGVPRFYRAKKNHVITTQ TEHKCVLDSCRVLEAEGFKVTYLPVKQNGLVDMKVSHHRQSELCRSKKIFFHTDAAQAVGKIPIDVDDMKIDLMSISGHK IYGPKGVGALYVRRRPRVRIEAPQSGGGQERGMRSGTVPTPLCVGLGSACELAMNEMEYDHQRIKALSDRLINKINAELP QVIRNGDPEQTYPGCVNLSFAFVEGESLLMALKDIALSSGSACTSASLEPSYVLRAIGAEEDLAHSSIRFGIGRFTTEEE VDYTAQKCIEHVTRLREMSPLWEMVQEGIDLKSIQWSQH |
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